Query= PFL1425w Pf Annotation|Plasmodium_falciparum_Stanford|(protein coding) t-complex protein 1, gamma subunit, putative (542 letters)
>FBgn0015019 type=protein;
           loc=3R:join(12473618..12473651,12473710..12473771,
           12473857..12474356,12474423..12475461); ID=FBpp0082788;
           name=Cctgamma-PB; parent=FBgn0015019,FBtr0083338;
           dbxref=FlyBase:FBpp0082788,
           FlyBase_Annotation_IDs:CG8977-PB,GB_protein:AAN13716.1,
           GB_protein:AAN13716;
           MD5=ae00d437d2b4d05c11d214d30848a33e; release=r5.1;
           species=Dmel; length=544;
          Length = 544

 Score =  588 bits (1515), Expect = e-172
 Identities = 293/527 (55%), Positives = 393/527 (74%), Gaps = 11/527 (2%)

Query: 8   VLVFKPNTKREEGRKTQLSNIQASRAVSDIVKTTLGPMAMLKMMLDPLGGIVITNDGNCI 67
           +LV   NTKRE GRK QL NIQA +A++D+++T LGP AMLKM++DP+GGIV+TNDGN I
Sbjct: 8   ILVLSQNTKRESGRKVQLENIQAGKAIADVIRTCLGPQAMLKMLMDPMGGIVMTNDGNAI 67

Query: 68  LREVDVAHPAAKSLIELSRSQDEEVGDGTTSVVILSGELLSVAETFLRQNIHPTIIVNCY 127
           LRE+ V HPAAKS+IE++R+QDEEVGDGTTSV++L+GE+L+ AE FL+Q IHPT+I+  Y
Sbjct: 68  LREITVQHPAAKSMIEIARTQDEEVGDGTTSVIVLAGEMLAAAEPFLQQQIHPTVIIRAY 127

Query: 128 MNALDSSLKFLE-EISIDIDVNSESDLLKAIDSCLSTKFVNRYNKIVSKLALEATRCVKM 186
             AL+  +  L+ ++SI +DV  ++ +   + +C+ TKF+ +++ +  K+AL+A   V +
Sbjct: 128 REALEDIVGHLQSQLSIQLDVKDKAKMADVVKACVGTKFIGKWSDLAVKIALDAVETVTL 187

Query: 187 DNLMGRKEIDIKRYAKVEKIPGGDITDSYVLKGVMINKDITHPKMRRYIKNPRILLLDCT 246
               GR E+DIKRYAKVEKIPGG I +S VLKGVMINKD+THPKMRR I+NPRI+LLDC+
Sbjct: 188 SE-NGRLEVDIKRYAKVEKIPGGAIEESCVLKGVMINKDVTHPKMRRLIENPRIVLLDCS 246

Query: 247 LEYKKAESQTNVEILDEKTWNELLLQEEIEVKKMCEYIIDSKCDIVITEKGVSDLAQHFL 306
           LEYKK ESQTNVEI+ E+ +  +L  EE  V+++C  II  K D+V TEKGVSDLAQH+L
Sbjct: 247 LEYKKGESQTNVEIIGEQDFTRMLQIEEEFVQRICADIIAVKPDLVFTEKGVSDLAQHYL 306

Query: 307 VKKNISVIRRVRKTDLNRLERISGATIVNRCEEIVEGDIGTKCGLFEIKKIGDDYYSFFV 366
           +K  I+ IRR+RKTD  R+ R  GATIVNR EE+ E D+GT  GLFE+KKIGD+Y++F  
Sbjct: 307 LKAGITAIRRLRKTDNLRIARACGATIVNRTEELTEKDVGTGAGLFEVKKIGDEYFTFVT 366

Query: 367 ECKDPHACTILLRGSTKDVLNEIERNLHDGMNVAKNILMEGKLLYGGGCTEIRVGQYLIK 426
           ECK+P ACTILLRG++KD+LNE ERNL D ++VA+N+++E +L+ GGG  E+   Q L +
Sbjct: 367 ECKEPKACTILLRGASKDILNETERNLQDALHVARNLVLEPRLVAGGGAVEMAASQLLTR 426

Query: 427 EAAKFNDSRKSITEAVASALEIIPKILAQNSGVNVVKTMNELRIKHEQEGGQ---EFGID 483
           +        K    AVA ALEIIP+ LAQN G N ++ +  LR KH    G     +GID
Sbjct: 427 KQV------KGPYTAVAHALEIIPRTLAQNCGANTIRALTALRAKHASHTGDGVCAWGID 480

Query: 484 GITGDIIKVTTKNIWDLLSVKKQIYKSAIEAASMILRIDDVVSGVGK 530
           G +G+I+ +  KNIW+ L+VK Q YK+A+E A ++LRIDD+VSG  K
Sbjct: 481 GESGEIVDMNVKNIWEPLAVKLQTYKTAVETAILLLRIDDIVSGSKK 527

 Score = 16.5 bits (31), Expect = 2.7
 Identities = 14/49 (28%), Positives = 23/49 (46%), Gaps = 11/49 (22%)

Query: 484 GITGDIIKVTTKNIWDLLSVKKQIYKSAIEAASMILRIDDVVSGVGKDE 532
           G + DI+  T +N+ D L V          A +++L    +V+G G  E
Sbjct: 380 GASKDILNETERNLQDALHV----------ARNLVLE-PRLVAGGGAVE 417
Lambda     K      H
   0.317    0.136    0.377 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 772
Number of extensions: 27
Number of successful extensions: 9
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2
Number of HSP's successfully gapped: 2
Length of query: 542
Length of database: 544
Length adjustment: 35
Effective length of query: 507
Effective length of database: 509
Effective search space:   258063
Effective search space used:   258063
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 27 (15.2 bits)
S2: 27 (15.0 bits)