Query= PFL1425w Pf
Annotation|Plasmodium_falciparum_Stanford|(protein coding) t-complex
protein 1, gamma subunit, putative
(542 letters)
>FBgn0015019 type=protein;
loc=3R:join(12473618..12473651,12473710..12473771,
12473857..12474356,12474423..12475461); ID=FBpp0082788;
name=Cctgamma-PB; parent=FBgn0015019,FBtr0083338;
dbxref=FlyBase:FBpp0082788,
FlyBase_Annotation_IDs:CG8977-PB,GB_protein:AAN13716.1,
GB_protein:AAN13716;
MD5=ae00d437d2b4d05c11d214d30848a33e; release=r5.1;
species=Dmel; length=544;
Length = 544
Score = 588 bits (1515), Expect = e-172
Identities = 293/527 (55%), Positives = 393/527 (74%), Gaps = 11/527 (2%)
Query: 8 VLVFKPNTKREEGRKTQLSNIQASRAVSDIVKTTLGPMAMLKMMLDPLGGIVITNDGNCI 67
+LV NTKRE GRK QL NIQA +A++D+++T LGP AMLKM++DP+GGIV+TNDGN I
Sbjct: 8 ILVLSQNTKRESGRKVQLENIQAGKAIADVIRTCLGPQAMLKMLMDPMGGIVMTNDGNAI 67
Query: 68 LREVDVAHPAAKSLIELSRSQDEEVGDGTTSVVILSGELLSVAETFLRQNIHPTIIVNCY 127
LRE+ V HPAAKS+IE++R+QDEEVGDGTTSV++L+GE+L+ AE FL+Q IHPT+I+ Y
Sbjct: 68 LREITVQHPAAKSMIEIARTQDEEVGDGTTSVIVLAGEMLAAAEPFLQQQIHPTVIIRAY 127
Query: 128 MNALDSSLKFLE-EISIDIDVNSESDLLKAIDSCLSTKFVNRYNKIVSKLALEATRCVKM 186
AL+ + L+ ++SI +DV ++ + + +C+ TKF+ +++ + K+AL+A V +
Sbjct: 128 REALEDIVGHLQSQLSIQLDVKDKAKMADVVKACVGTKFIGKWSDLAVKIALDAVETVTL 187
Query: 187 DNLMGRKEIDIKRYAKVEKIPGGDITDSYVLKGVMINKDITHPKMRRYIKNPRILLLDCT 246
GR E+DIKRYAKVEKIPGG I +S VLKGVMINKD+THPKMRR I+NPRI+LLDC+
Sbjct: 188 SE-NGRLEVDIKRYAKVEKIPGGAIEESCVLKGVMINKDVTHPKMRRLIENPRIVLLDCS 246
Query: 247 LEYKKAESQTNVEILDEKTWNELLLQEEIEVKKMCEYIIDSKCDIVITEKGVSDLAQHFL 306
LEYKK ESQTNVEI+ E+ + +L EE V+++C II K D+V TEKGVSDLAQH+L
Sbjct: 247 LEYKKGESQTNVEIIGEQDFTRMLQIEEEFVQRICADIIAVKPDLVFTEKGVSDLAQHYL 306
Query: 307 VKKNISVIRRVRKTDLNRLERISGATIVNRCEEIVEGDIGTKCGLFEIKKIGDDYYSFFV 366
+K I+ IRR+RKTD R+ R GATIVNR EE+ E D+GT GLFE+KKIGD+Y++F
Sbjct: 307 LKAGITAIRRLRKTDNLRIARACGATIVNRTEELTEKDVGTGAGLFEVKKIGDEYFTFVT 366
Query: 367 ECKDPHACTILLRGSTKDVLNEIERNLHDGMNVAKNILMEGKLLYGGGCTEIRVGQYLIK 426
ECK+P ACTILLRG++KD+LNE ERNL D ++VA+N+++E +L+ GGG E+ Q L +
Sbjct: 367 ECKEPKACTILLRGASKDILNETERNLQDALHVARNLVLEPRLVAGGGAVEMAASQLLTR 426
Query: 427 EAAKFNDSRKSITEAVASALEIIPKILAQNSGVNVVKTMNELRIKHEQEGGQ---EFGID 483
+ K AVA ALEIIP+ LAQN G N ++ + LR KH G +GID
Sbjct: 427 KQV------KGPYTAVAHALEIIPRTLAQNCGANTIRALTALRAKHASHTGDGVCAWGID 480
Query: 484 GITGDIIKVTTKNIWDLLSVKKQIYKSAIEAASMILRIDDVVSGVGK 530
G +G+I+ + KNIW+ L+VK Q YK+A+E A ++LRIDD+VSG K
Sbjct: 481 GESGEIVDMNVKNIWEPLAVKLQTYKTAVETAILLLRIDDIVSGSKK 527
Score = 16.5 bits (31), Expect = 2.7
Identities = 14/49 (28%), Positives = 23/49 (46%), Gaps = 11/49 (22%)
Query: 484 GITGDIIKVTTKNIWDLLSVKKQIYKSAIEAASMILRIDDVVSGVGKDE 532
G + DI+ T +N+ D L V A +++L +V+G G E
Sbjct: 380 GASKDILNETERNLQDALHV----------ARNLVLE-PRLVAGGGAVE 417
Lambda K H
0.317 0.136 0.377
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 772
Number of extensions: 27
Number of successful extensions: 9
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2
Number of HSP's successfully gapped: 2
Length of query: 542
Length of database: 544
Length adjustment: 35
Effective length of query: 507
Effective length of database: 509
Effective search space: 258063
Effective search space used: 258063
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 27 (15.2 bits)
S2: 27 (15.0 bits)