Query= PFL1425w Pf
Annotation|Plasmodium_falciparum_Stanford|(protein coding) t-complex
protein 1, gamma subunit, putative
(542 letters)
>YJL014W CCT3 SGDID:S000003551, Chr X from 407474-409078, Verified
ORF, "Subunit of the cytosolic chaperonin Cct ring
complex, related to Tcp1p, required for the assembly of
actin and tubulins in vivo"
Length = 534
Score = 548 bits (1413), Expect = e-160
Identities = 272/533 (51%), Positives = 394/533 (73%), Gaps = 11/533 (2%)
Query: 8 VLVFKPNTKREEGRKTQLSNIQASRAVSDIVKTTLGPMAMLKMMLDPLGGIVITNDGNCI 67
V+ + +R GR+ Q+SNI A++AV+D+++T LGP AMLKM+LDP+GG+V+TNDG+ I
Sbjct: 5 VVFMNASQERTTGRQAQISNITAAKAVADVIRTCLGPKAMLKMLLDPMGGLVLTNDGHAI 64
Query: 68 LREVDVAHPAAKSLIELSRSQDEEVGDGTTSVVILSGELLSVAETFL-RQNIHPTIIVNC 126
LRE+DVAHPAAKS++ELSR+QDEEVGDGTT+V+IL+GE+L+ +L +NIHP II+
Sbjct: 65 LREIDVAHPAAKSMLELSRTQDEEVGDGTTTVIILAGEILAQCAPYLIEKNIHPVIIIQA 124
Query: 127 YMNALDSSLKFLEEISIDIDVNSESDLLKAIDSCLSTKFVNRYNKIVSKLALEATRCVKM 186
AL +L+ ++++S +DV +++ + K I + + TK+V +++ + +LAL+A + V+
Sbjct: 125 LKKALTDALEVIKQVSKPVDVENDAAMKKLIQASIGTKYVIHWSEKMCELALDAVKTVRK 184
Query: 187 DNLMGRK-------EIDIKRYAKVEKIPGGDITDSYVLKGVMINKDITHPKMRRYIKNPR 239
D +G+ EIDIKRY +VEKIPGGD+ DS VLKGV++NKD+ HPKM R+I+NPR
Sbjct: 185 D--LGQTVEGEPNFEIDIKRYVRVEKIPGGDVLDSRVLKGVLLNKDVVHPKMSRHIENPR 242
Query: 240 ILLLDCTLEYKKAESQTNVEILDEKTWNELLLQEEIEVKKMCEYIIDSKCDIVITEKGVS 299
++LLDC LEYKK ESQTN+EI E+ WN +L EE +V+ MCE I+ + +VITEKGVS
Sbjct: 243 VVLLDCPLEYKKGESQTNIEIEKEEDWNRILQIEEEQVQLMCEQILAVRPTLVITEKGVS 302
Query: 300 DLAQHFLVKKNISVIRRVRKTDLNRLERISGATIVNRCEEIVEGDIGTKCGLFEIKKIGD 359
DLAQH+L+K SV+RRV+K+D NR+ R++GATIVNR E++ E D+GT CGLF+++ IGD
Sbjct: 303 DLAQHYLLKGGCSVLRRVKKSDNNRIARVTGATIVNRVEDLKESDVGTNCGLFKVEMIGD 362
Query: 360 DYYSFFVECKDPHACTILLRGSTKDVLNEIERNLHDGMNVAKNILMEGKLLYGGGCTEIR 419
+Y+SF CK+P ACTI+LRG +KD+LNEI+RNL D M VA+N+++ L GGG TE+
Sbjct: 363 EYFSFLDNCKEPKACTIMLRGGSKDILNEIDRNLQDAMAVARNVMLSPSLSPGGGATEMA 422
Query: 420 VGQYLIKEAAKFNDSRKSITEAVASALEIIPKILAQNSGVNVVKTMNELRIKHEQEGGQE 479
V L ++A + ++ +AVA A+E IP+ L QN+G + ++ +++LR KH Q G
Sbjct: 423 VSVKLAEKAKQLEGIQQWPYQAVADAMECIPRTLIQNAGGDPIRLLSQLRAKHAQ-GNFT 481
Query: 480 FGIDGITGDIIKVTTKNIWDLLSVKKQIYKSAIEAASMILRIDDVVSGVGKDE 532
GIDG G I+ + + IW+ +K+Q K+AIE+A ++LR+DD+VSGV K E
Sbjct: 482 TGIDGDKGKIVDMVSYGIWEPEVIKQQSVKTAIESACLLLRVDDIVSGVRKQE 534
Lambda K H
0.317 0.136 0.377
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 826
Number of extensions: 30
Number of successful extensions: 8
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 542
Length of database: 534
Length adjustment: 35
Effective length of query: 507
Effective length of database: 499
Effective search space: 252993
Effective search space used: 252993
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 27 (15.2 bits)
S2: 27 (15.0 bits)