>YMR116C ASC1 SGDID:S000004722, Chr XIII from
           500687-500151,499877-499455, reverse complement,
           Verified ORF, "WD repeat protein (G-beta like protein)
           involved in translation regulation; required for
           repression of Gcn4p activity in the absence of
           amino-acid starvation; core component of the ribosome;
           ortholog of mammalian RACK1"
          Length = 319

 Score = 33.1 bits (74), Expect = 1e-05
 Identities = 19/57 (33%), Positives = 31/57 (54%), Gaps = 7/57 (12%)

Query: 364 NKIIKSQNVVTNEMFLNLKDFTTFIGHKSQVLKCYVDDKKQILISLASD-GIKIWDI 419
           +K ++  +V T E +        F+GHKS V+   +D K  ++IS + D  IK+W I
Sbjct: 86  DKTLRLWDVATGETYQR------FVGHKSDVMSVDIDKKASMIISGSRDKTIKVWTI 136

 Score = 26.6 bits (57), Expect = 0.001
 Identities = 11/29 (37%), Positives = 17/29 (58%)

Query: 186 LISLTNDGTIYVWGLKSKEAVHILKTQTE 214
           + S   DG I +W L +K+A++ L  Q E
Sbjct: 211 IASAGKDGEIMLWNLAAKKAMYTLSAQDE 239

 Score = 24.3 bits (51), Expect = 0.007
 Identities = 17/61 (27%), Positives = 26/61 (42%), Gaps = 4/61 (6%)

Query: 380 NLKDF---TTFIGHKSQVLKCYVDDKKQILISLASDG-IKIWDIYNCYAIKTLKYGENVI 435
           NL  F     FIGH S +          ++ S   DG I +W++    A+ TL   + V 
Sbjct: 182 NLNQFQIEADFIGHNSNINTLTASPDGTLIASAGKDGEIMLWNLAAKKAMYTLSAQDEVF 241

Query: 436 N 436
           +
Sbjct: 242 S 242

 Score = 23.9 bits (50), Expect = 0.009
 Identities = 19/100 (19%), Positives = 34/100 (34%), Gaps = 7/100 (7%)

Query: 101 IWSAISGFLINTFQAHFGPIKDILIDQLVNVLYTYSDDNIVHVYNLHDLFRKKKIQPMLF 160
           +W   +G     F  H   +  + ID+  +++ + S D  + V+ +       K Q +  
Sbjct: 91  LWDVATGETYQRFVGHKSDVMSVDIDKKASMIISGSRDKTIKVWTI-------KGQCLAT 143

Query: 161 YQHXXXXXXXXXXXXTPNIYDTLYTLISLTNDGTIYVWGL 200
                               D   T+IS  ND  +  W L
Sbjct: 144 LLGHNDWVSQVRVVPNEKADDDSVTIISAGNDKMVKAWNL 183

 Score = 19.6 bits (39), Expect = 0.17
 Identities = 16/55 (29%), Positives = 25/55 (45%), Gaps = 8/55 (14%)

Query: 386 TFIGHKSQVLKCYV------DDKKQILISLASDG-IKIWDIYNCYAIKTLKYGEN 433
           T +GH   V +  V      DD    +IS  +D  +K W++ N + I+    G N
Sbjct: 143 TLLGHNDWVSQVRVVPNEKADDDSVTIISAGNDKMVKAWNL-NQFQIEADFIGHN 196

 Score = 16.9 bits (32), Expect = 1.1
 Identities = 6/37 (16%), Positives = 16/37 (43%)

Query: 70  YTKYVRAHLNVIKLTTNERIIFGGDKIGNVYIWSAIS 106
           Y+K    H   +  + + + +F G     + +W  ++
Sbjct: 281 YSKAAEPHAVSLAWSADGQTLFAGYTDNVIRVWQVMT 317

Lambda     K      H
   0.322    0.138    0.410 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 300
Number of extensions: 16
Number of successful extensions: 8
Number of sequences better than 10.0: 1
Number of HSP's gapped: 6
Number of HSP's successfully gapped: 6
Length of query: 502
Length of database: 319
Length adjustment: 31
Effective length of query: 471
Effective length of database: 288
Effective search space:   135648
Effective search space used:   135648
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 24 (14.0 bits)
S2: 24 (13.9 bits)