>YPR175W DPB2 SGDID:S000006379, Chr XVI from 888970-891039, Verified
           ORF, "Second largest subunit of DNA polymerase II (DNA
           polymerase epsilon), required for normal yeast
           chromosomal replication; expression peaks at the G1/S
           phase boundary; potential Cdc28p substrate"
          Length = 689

 Score = 59.7 bits (143), Expect = 4e-13
 Identities = 79/379 (20%), Positives = 152/379 (40%), Gaps = 68/379 (17%)

Query: 258 IIGILGLNRDGELVIQGIRNEVKLFINQSCIINNGIYCIGHIILLQGRMKLLNKTFYVTE 317
           ++G+L  N  G   ++     V++ I+Q+       Y  G ++L++G    +   F+VT 
Sbjct: 284 LLGLLNKNFKGNWSLEDPSGSVEIDISQTIPTQGHYYVPGCMVLVEGIYYSVGNKFHVTS 343

Query: 318 IMHPPRNYDDEKNEE----DIF--YDFENEN-----EKKEIGEYEIIVRNNDKKQNWIIM 366
           +  PP    +   E     D+   +   N N     +K       ++ +     +  I+ 
Sbjct: 344 MTLPPGERREITLETIGNLDLLGIHGISNNNFIARLDKDLKIRLHLLEKELTDHKFVILG 403

Query: 367 HDIYLDNPSTFEILEKMFSLYVNTYPDNELPIGFILMGDFISLKF-----DYNKNFNDLY 421
            +++LD+      L K+         +++ P   I  G F S+         N + +  +
Sbjct: 404 ANLFLDDLKIMTALSKILQKL-----NDDPPTLLIWQGSFTSVPVFASMSSRNISSSTQF 458

Query: 422 IKGFEKLSVLLISKFKLILQNCYLIFIPGKND------PCACKNSIPKMPILPYYIKKFE 475
              F+ L+ LL S+F  + +N  +IFIPG ND            ++P+ PI   + KK  
Sbjct: 459 KNNFDALATLL-SRFDNLTENTTMIFIPGPNDLWGSMVSLGASGTLPQDPIPSAFTKKIN 517

Query: 476 QNIQSFFSCKKKIIFATNPCRIRHFNKKMIFFRQDILN-------DLIWSSSINATDDNK 528
           +         K +++++NP RI + +++++ FR D+         +  ++ S +   +N 
Sbjct: 518 KVC-------KNVVWSSNPTRIAYLSQEIVIFRDDLSGRFKRHRLEFPFNESEDVYTEND 570

Query: 529 NNLQ---DI----------------------LISTIVGQSHIYPIPHDNR-ILKRYSSFL 562
           N +    DI                      L+ TI+ Q H+ P     R I       L
Sbjct: 571 NMMSKDTDIVPIDELVKEPDQLPQKVQETRKLVKTILDQGHLSPFLDSLRPISWDLDHTL 630

Query: 563 FLYPLPNFICISDNTCNSF 581
            L P+P+ + + D T   F
Sbjct: 631 TLCPIPSTMVLCDTTSAQF 649

 Score = 18.5 bits (36), Expect = 1.0
 Identities = 6/13 (46%), Positives = 9/13 (69%)

Query: 521 INATDDNKNNLQD 533
           +  TDD++NN  D
Sbjct: 112 LGRTDDDENNSDD 124

Lambda     K      H
   0.322    0.141    0.421 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 969
Number of extensions: 40
Number of successful extensions: 7
Number of sequences better than 10.0: 1
Number of HSP's gapped: 6
Number of HSP's successfully gapped: 5
Length of query: 624
Length of database: 689
Length adjustment: 38
Effective length of query: 586
Effective length of database: 651
Effective search space:   381486
Effective search space used:   381486
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 28 (15.8 bits)
S2: 28 (15.4 bits)