Query= PFL2055w Pf
Annotation|Plasmodium_falciparum_Stanford|(protein coding) 40S
ribosomal protein S17, putative
(137 letters)
>FBgn0005533 type=protein;
loc=3L:complement(9421974..9422214,9422274..9422425,
9422795..9422797); ID=FBpp0076207; name=RpS17-PB;
parent=FBgn0005533,FBtr0076479;
dbxref=FlyBase:FBpp0076207,
FlyBase_Annotation_IDs:CG3922-PB,GB_protein:AAF50272.1,
GB_protein:AAF50272;
MD5=03edf5c0f514b34ba6142f641ccf4f7a; release=r5.1;
species=Dmel; length=131;
Length = 131
Score = 126 bits (316), Expect = 1e-34
Identities = 66/127 (51%), Positives = 90/127 (70%), Gaps = 3/127 (2%)
Query: 1 MGRVRTKTIKRAARQIVEKYYAKLTLDFQINKKITEEVAIIPSKRMKNKVAGFVTHLMKR 60
MGRVRTKT+K+AA+ I+EKYY +LTLDF NK+I EEVAIIP+K ++NK+AG+VTHLM R
Sbjct: 1 MGRVRTKTVKKAAKVIIEKYYTRLTLDFHTNKRICEEVAIIPTKPLRNKIAGYVTHLMGR 60
Query: 61 IQKGPVRGISLKLQXXXXXXXLDFVPEKSQIDVSVIYVEPDTLRMIKSLGI-NISNMKVH 119
++ VRGIS+KLQ ++VP S ++ +I V+ DT M+K L NI +++
Sbjct: 61 LRHSQVRGISIKLQEEERERRDNYVPAVSALEQDIIEVDADTKEMLKLLDFHNIRGLQLT 120
Query: 120 NPMINTN 126
P NTN
Sbjct: 121 QP--NTN 125
Lambda K H
0.320 0.134 0.363
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 78
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 137
Length of database: 131
Length adjustment: 15
Effective length of query: 122
Effective length of database: 116
Effective search space: 14152
Effective search space used: 14152
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 16 (10.3 bits)
S2: 16 (10.8 bits)