Query= PFL2055w Pf Annotation|Plasmodium_falciparum_Stanford|(protein coding) 40S ribosomal protein S17, putative (137 letters)
>YML024W RPS17A SGDID:S000004486, Chr XIII from
           225889-225891,226290-226697, Verified ORF, "Ribosomal
           protein 51 (rp51) of the small (40s) subunit; nearly
           identical to Rps17Bp and has similarity to rat S17
           ribosomal protein"
          Length = 136

 Score =  134 bits (338), Expect = 4e-37
 Identities = 70/136 (51%), Positives = 96/136 (70%), Gaps = 9/136 (6%)

Query: 1   MGRVRTKTIKRAARQIVEKYYAKLTLDFQINKKITEEVAIIPSKRMKNKVAGFVTHLMKR 60
           MGRVRTKT+KRA++ ++E+YY KLTLDFQ NK++ +E+A I SKR++NK+AG+ THLMKR
Sbjct: 1   MGRVRTKTVKRASKALIERYYPKLTLDFQTNKRLCDEIATIQSKRLRNKIAGYTTHLMKR 60

Query: 61  IQKGPVRGISLKLQXXXXXXXLDFVPEKSQIDVS----VIYVEPDTLRMIKSLGINISNM 116
           IQKGPVRGIS KLQ         +VPE S +D+S    V+ V+  T  ++KSLG     +
Sbjct: 61  IQKGPVRGISFKLQEEERERKDQYVPEVSALDLSRSNGVLNVDNQTSDLVKSLG-----L 115

Query: 117 KVHNPMINTNQQKQNR 132
           K+   +IN + Q+  R
Sbjct: 116 KLPLSVINVSAQRDRR 131
Lambda     K      H
   0.320    0.134    0.363 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 75
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 137
Length of database: 136
Length adjustment: 15
Effective length of query: 122
Effective length of database: 121
Effective search space:    14762
Effective search space used:    14762
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 16 (10.3 bits)
S2: 16 (10.8 bits)