>YER136W GDI1 SGDID:S000000938, Chr V from 439612-440967, Verified
           ORF, "GDP dissociation inhibitor, regulates vesicle
           traffic in secretory pathways by regulating the
           dissociation of GDP from the Sec4/Ypt/rab family of GTP
           binding proteins"
          Length = 451

 Score =  385 bits (990), Expect = e-111
 Identities = 209/444 (47%), Positives = 287/444 (64%), Gaps = 19/444 (4%)

Query: 5   YDVIILGTGLKECILSGLLSHYGKKILVLDRNPYYGGETASLNLTNLYNTFKP----KEN 60
           YDVI+LGTG+ ECILSGLLS  GKK+L +D+  +YGGE AS+ L+ LY  FK     KE 
Sbjct: 10  YDVIVLGTGITECILSGLLSVDGKKVLHIDKQDHYGGEAASVTLSQLYEKFKQNPISKEE 69

Query: 61  IPSKYGENRHWNVDLIPKFILVGGNLVKILKKTRVTNYLEWLVVEGSYVYQHQKKGFLTS 120
             SK+G++R WNVDLIPKF++  G L  IL  T VT Y+++  V GSYV++  K      
Sbjct: 70  RESKFGKDRDWNVDLIPKFLMANGELTNILIHTDVTRYVDFKQVSGSYVFKQGK------ 123

Query: 121 EKFIHKVPATDMEALVSPLLSLMEKNRCKNFYQYVSEWDANKRNTWDNLDPYKLTMLEIY 180
              I+KVPA ++EA+ SPL+ + EK R K F +++S +  +  +T   LD  K TM E+Y
Sbjct: 124 ---IYKVPANEIEAISSPLMGIFEKRRMKKFLEWISSYKEDDLSTHQGLDLDKNTMDEVY 180

Query: 181 KHFNLCQLTIDFLGHAVALYLNDDYLKQPAYLTLERIKLYMQSISAFGKSPFIYPLYGLG 240
             F L   T +F+GHA+AL+ NDDYL+QPA  + ERI LY QS++ +GKSP++YP+YGLG
Sbjct: 181 YKFGLGNSTKEFIGHAMALWTNDDYLQQPARPSFERILLYCQSVARYGKSPYLYPMYGLG 240

Query: 241 GIPEGFSRMCAINGGTFMLXXXXXXXXXXXXXXXC-GIKSSDGEIAYCDKVICDPSYVMH 299
            +P+GF+R+ AI GGT+ML                 G+K+  G       VI DP+Y   
Sbjct: 241 ELPQGFARLSAIYGGTYMLDTPIDEVLYKKDTGKFEGVKTKLGTFK-APLVIADPTY--- 296

Query: 300 LKNKIKKIGQ-VIRCICILSNPIPETNQTNSCQIIIPQNQLNRKSDIYINLVSFQHGVTL 358
              K K  GQ VIR ICIL++P+P T+  +S QIIIPQ+QL RKSDIY+ +VS  H V  
Sbjct: 297 FPEKCKSTGQRVIRAICILNHPVPNTSNADSLQIIIPQSQLGRKSDIYVAIVSDAHNVCS 356

Query: 359 KGKYIAIVSATVETNNPIKEIEKPLELLGTIEEKFVKISDLYVSTSKKPADNIFVTSSYD 418
           KG Y+AI+S  +ET+ P  E+E   +LLG IEEKF+ I++L+        DNI+++ SYD
Sbjct: 357 KGHYLAIISTIIETDKPHIELEPAFKLLGPIEEKFMGIAELFEPREDGSKDNIYLSRSYD 416

Query: 419 ATSHFETATNDLLQIWENLWGQKL 442
           A+SHFE+ T+D+  I+  + G  L
Sbjct: 417 ASSHFESMTDDVKDIYFRVTGHPL 440

Lambda     K      H
   0.319    0.138    0.417 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 616
Number of extensions: 33
Number of successful extensions: 7
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 459
Length of database: 451
Length adjustment: 33
Effective length of query: 426
Effective length of database: 418
Effective search space:   178068
Effective search space used:   178068
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 25 (14.4 bits)
S2: 25 (14.2 bits)