>YKL018W SWD2 SGDID:S000001501, Chr XI from 403745-404734, Verified
           ORF, "Subunit of the COMPASS (Set1C) complex, which
           methylates histone H3 on lys 4 and is involved in
           telomeric silencing; subunit of CPF (cleavage and
           polyadenylation factor), a complex involved in RNAP II
           transcription termination"
          Length = 329

 Score = 74.3 bits (181), Expect = 4e-18
 Identities = 75/336 (22%), Positives = 139/336 (41%), Gaps = 59/336 (17%)

Query: 34  NISWSCDGELLLASNGNDSITLYSLIKGNNIKTLYSKKSGVDVVRFLNNTNEVIICSTKS 93
           ++++  +G+ LL S+ ND++ LYS      + T+ SKK G     F +  NE I  ST  
Sbjct: 32  SLNFDDNGQFLLTSSSNDTMQLYSATNCKFLDTIASKKYGCHSAIFTHAQNECIYSSTMK 91

Query: 94  NNTEHKQFLRFWDIKENKYIKSLPQIGNICELNGISINYNKKLMLVNSDDGHVKLYYFNC 153
           N       +++ +++ N+Y++     G +  +N + +N      L +S D  V+L+    
Sbjct: 92  NFD-----IKYLNLETNQYLRYFSGHGAL--VNDLKMNPVNDTFLSSSYDESVRLWDLKI 144

Query: 154 DSPLILYKSNFVRPVSCFDNEGHIF-IASYGKKEIHFYDLLMYDRGEYNIIDLKNIMTNE 212
             P ++  S  V     +D  G +F + +    EI  Y+L     G + II + +   ++
Sbjct: 145 SKPQVIIPS-LVPNCIAYDPSGLVFALGNPENFEIGLYNLKKIQEGPFLIIKINDATFSQ 203

Query: 213 EFITNLFFTPDNKYIIISTNHNNHYKIDSITGTYICTYKYPRSENQQWDMSNTTKDIINQ 272
                L F+ + KY+++ ++   H   D+ TG             Q +++  T    + +
Sbjct: 204 --WNKLEFSNNGKYLLVGSSIGKHLIFDAFTG------------QQLFELIGTRAFPMRE 249

Query: 273 YTYSQTNDKLQQTLNNTNEKNIYFQNRNDMFFMPTITPDGHYVMCGGKDAGIHIWSEG-- 330
           +  S +                              TPDG +V+    D  I IW+    
Sbjct: 250 FLDSGS---------------------------ACFTPDGEFVLGTDYDGRIAIWNHSDS 282

Query: 331 -GNHVTTLYG------HEGPPNNVSFNPKCSVLASS 359
             N V    G      HE  P +++FNPK S+  ++
Sbjct: 283 ISNKVLRPQGFIPCVSHETCPRSIAFNPKYSMFVTA 318

 Score = 19.6 bits (39), Expect = 0.13
 Identities = 24/117 (20%), Positives = 48/117 (41%), Gaps = 19/117 (16%)

Query: 256 ENQQWDMSNTTKDIINQYTYSQTNDKLQQTLNNTN---EKNIYFQNRNDMFFMPTITPDG 312
           +N Q+ +++++ D +    YS TN K   T+ +        I+   +N+  +  T+    
Sbjct: 37  DNGQFLLTSSSNDTMQ--LYSATNCKFLDTIASKKYGCHSAIFTHAQNECIYSSTM---- 90

Query: 313 HYVMCGGKDAGI-HIWSEGGNHVTTLYGHEGPPNNVSFNPKCSVLASSCL--NIALW 366
                  K+  I ++  E   ++    GH    N++  NP      SS    ++ LW
Sbjct: 91  -------KNFDIKYLNLETNQYLRYFSGHGALVNDLKMNPVNDTFLSSSYDESVRLW 140

 Score = 19.2 bits (38), Expect = 0.16
 Identities = 22/115 (19%), Positives = 44/115 (38%), Gaps = 6/115 (5%)

Query: 215 ITNLFFTPDNKYIIISTNHNNHYKIDSITGTYICTYKYPRSENQQWDMSNTTKDIINQYT 274
           +T+L F  DN   +++++ N+  ++ S T    C +    +  +    S       N+  
Sbjct: 30  VTSLNFD-DNGQFLLTSSSNDTMQLYSATN---CKFLDTIASKKYGCHSAIFTHAQNECI 85

Query: 275 YSQT--NDKLQQTLNNTNEKNIYFQNRNDMFFMPTITPDGHYVMCGGKDAGIHIW 327
           YS T  N  ++     TN+   YF     +     + P     +    D  + +W
Sbjct: 86  YSSTMKNFDIKYLNLETNQYLRYFSGHGALVNDLKMNPVNDTFLSSSYDESVRLW 140

Lambda     K      H
   0.318    0.135    0.413 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 359
Number of extensions: 23
Number of successful extensions: 11
Number of sequences better than 10.0: 1
Number of HSP's gapped: 6
Number of HSP's successfully gapped: 5
Length of query: 370
Length of database: 329
Length adjustment: 29
Effective length of query: 341
Effective length of database: 300
Effective search space:   102300
Effective search space used:   102300
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 23 (13.4 bits)
S2: 23 (13.5 bits)