>YKL099C UTP11 SGDID:S000001582, Chr XI from 256116-255364,
          reverse complement, Verified ORF, "Nucleolar protein,
          component of the small subunit (SSU) processome
          containing the U3 snoRNA that is involved in processing
          of pre-18S rRNA"
          Length = 250

 Score = 31.6 bits (70), Expect = 1e-05
 Identities = 21/74 (28%), Positives = 30/74 (40%), Gaps = 1/74 (1%)

Query: 1  MSNFKNIIPKRTYLERGQAKHRLHLGELEKKVDYGXXXXXXXXXXXXXXXXXXXXMTKNP 60
          M+   + + K+ + ER Q   R   G LEK  DY                       +NP
Sbjct: 1  MAKLVHDVQKKQHRERSQLTSRSRYGFLEKHKDYVKRAQDFHRKQSTLKVLREKAKERNP 60

Query: 61 DEFHTGMVHSRVTE 74
          DE++  M HSR T+
Sbjct: 61 DEYYHAM-HSRKTD 73

 Score = 15.8 bits (29), Expect = 0.76
 Identities = 12/41 (29%), Positives = 18/41 (43%), Gaps = 6/41 (14%)

Query: 120 QMNIPLRYVFNNSHELYNEN------EIYTLKAENKKLKKR 154
           Q+    RY F   H+ Y +       +  TLK   +K K+R
Sbjct: 18  QLTSRSRYGFLEKHKDYVKRAQDFHRKQSTLKVLREKAKER 58

Lambda     K      H
   0.314    0.134    0.379 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 149
Number of extensions: 6
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2
Number of HSP's successfully gapped: 2
Length of query: 212
Length of database: 250
Length adjustment: 23
Effective length of query: 189
Effective length of database: 227
Effective search space:    42903
Effective search space used:    42903
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 20 (12.0 bits)
S2: 20 (12.3 bits)