Query= PFL2330w Pf
Annotation|Plasmodium_falciparum_Stanford|(protein coding)
hypothetical protein
(746 letters)
>YCL024W KCC4 SGDID:S000000529, Chr III from 79162-82275, Verified
ORF, "Protein kinase of the bud neck involved in the
septin checkpoint, associates with septin proteins,
negatively regulates Swe1p by phosphorylation, shows
structural homology to bud neck kinases Gin4p and Hsl1p"
Length = 1037
Score = 32.3 bits (72), Expect = 1e-04
Identities = 15/47 (31%), Positives = 30/47 (63%)
Query: 369 IERLLYIYQINIYPQILSNINMYEISDNINLYIEEKEKGNARLIILD 415
IER + I ++ +P +LS +++E ++N+ L +E EKG +++D
Sbjct: 74 IEREIVIMKLLSHPNVLSLYDVWETNNNLYLILEYAEKGELFNLLVD 120
Score = 20.8 bits (42), Expect = 0.39
Identities = 15/41 (36%), Positives = 19/41 (46%), Gaps = 2/41 (4%)
Query: 188 LSTTNILELYYNKVEENSINVYQQYIYITWDVLKNTFLDRG 228
LS N+L LY V E + N+Y Y L N +D G
Sbjct: 84 LSHPNVLSLY--DVWETNNNLYLILEYAEKGELFNLLVDHG 122
Score = 20.0 bits (40), Expect = 0.66
Identities = 14/42 (33%), Positives = 21/42 (50%), Gaps = 2/42 (4%)
Query: 460 NNLSKTNKIETAVSIAEWGTIYINNEFTQLKDRSNYNNKNNL 501
+N S++ E A SI + I + + + KD N NN N L
Sbjct: 760 DNESRSEDPEIAESITDSRNIQYDEDDS--KDGDNVNNDNIL 799
Score = 19.2 bits (38), Expect = 1.1
Identities = 11/39 (28%), Positives = 16/39 (41%)
Query: 447 MVVFPNGDEIYFYNNLSKTNKIETAVSIAEWGTIYINNE 485
++V PNGD KT +T +A I + E
Sbjct: 994 IMVLPNGDGRSLIKFNKKTGSTKTLTKLATEIQIILQKE 1032
Score = 16.9 bits (32), Expect = 5.6
Identities = 6/15 (40%), Positives = 7/15 (46%)
Query: 258 NYKIGRNTTGGVEMG 272
N +G N G E G
Sbjct: 869 NSSVGENIEDGAEKG 883
Lambda K H
0.323 0.141 0.411
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 1382
Number of extensions: 59
Number of successful extensions: 5
Number of sequences better than 10.0: 1
Number of HSP's gapped: 5
Number of HSP's successfully gapped: 5
Length of query: 746
Length of database: 1037
Length adjustment: 43
Effective length of query: 703
Effective length of database: 994
Effective search space: 698782
Effective search space used: 698782
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 30 (16.8 bits)
S2: 30 (16.2 bits)