Protein PF07_0066 (PlasmoDB link) - New domain RRM_1 (Pfam link)

Sequence and domain localizations (colored) at: 653...728 / 791...855 

   1 MMKEKDKKQKKKRSVEKKEYHSSCESMNDEERVSSEDENKKRKNKEDDKDIREREKSKKH   60
  61 DEDKMKKKKVYEENYNNEDGNIIKKKKKNSQNEEMNNDNKNNDNDDQDDEHNSKYNDCKR  120
 121 KHKSNSKIIDDPNNSDNDIKRRKEMKKRRKKNDTNKRDTNKRDTNKRDTNKRDTNKRDTN  180
 181 KRDTNKSDTNNSDTNKSDTNNSDTSSINSNMSNNYKKNTSDISEMSDNSSTNTRRKKYRE  240
 241 EVMRKRKRDRSSEYKIKGSYKNIEIRMKNKNKYREKKKGRSQNSSNTKSDHSSNEKNYKK  300
 301 INDNNKYTSNDDDSSSNDSSNSNNGSNNYSDYSSTQKSRRNKLIRNVSSSASISERRRNK  360
 361 RKRRRSRSISIERRIKEKHRNIEDEDSEESDSKWRRRKRERSRDKYKERRRDSIRDRDKE  420
 421 RYRDKERYRERERDRDRDRDRERDRDRDRERERERHRHRERERERDRERDRDRERERERR  480
 481 KSYKFDSPPHSCDEEDNIKLSKTTISNNNKSMSILSNSMPTLNSNNIVLNNDLSVVNNSG  540
 541 SNNNIESLIQTLNSNILSPNNSSLTTSHILNNNNNNNSILNESNLISNKLRNNLLLEEKN  600
 601 LLLKQSHLNLLLNNQLKLNNVMSLQNLYKNVLNINDLNLPTIDVNIEKTARELYVGNIPQ  660
 661 HIDIQEIVKYLNSCLLILYNKENENENICLKACIRGDTHYAFVEFRNIQDTSNCMLLNGI  720
 721 NFYGNNLRIGRPKTFPIEYHSLIPQATIPAIDNYYLSQGLIGLRSFIIFCKNEEKMKNDG  780
 781 LPVNMIKLQKLCVSNISKNNDTSKIKELLEAFGEIKNFEFFYGDETSDTYISLVEYVNTE  840
 841 NAIQAHKILNQNTSYKIQFEHEIINDPHINNIIKNKYMKTENSILSLQVPTKVIVLNKIA  900
 901 TFEELSDSSEYKDIVEDIKIECDKYGKTLEVVLPVFSYRTYEYLKRVSKKTQAGNVDPLE  960
 961 NPMDKENKNDGDNKNDDDNNKNDGDDNNNDSNDNNNNDGDDNNNDGDNNNDDDNNNDDDN 1020
1021 NNDGDDNNDDDNEEEDLTHPNYDLTSIGCAFIHFENIESATKARKELSGRKFGANIIEAN 1080
1081 YFSEKKFLMKNFKNVKYNFKKSHSSLFNVNLKLGNLTYSDCSDDE 1125

Alignement of domain consensus (first line) on the sequence (colored line).

Each position reports the amino acid with highest probability; capital letters mean highly conserved residues (i.e. with probability > 50%).

Occurence 653...728 
  1 lfVgNLppdtteedLkdlFskf............GpiesikivrDkGfaFVeFedeedAe  59
653 LYVGNIPQHIDIQEIVKYLNSCllilynkeneneNICLKACIRGDTHYAFVEFRNIQDTS 712

 61 kAldlnGkelggrelr  76
713 NCMLLNGINFYGNNLR 728
Occurence 791...855 
  1 lfVgNLppdtteedLkdlFskfGpiesikivrDetgrskGfaFVeFedeedAekAldelg  59
791 LCVSNISKNNDTSKIKELLEAFGEIKNFEFFYGDETSDTYISLVEYVNTENAIQAHKILN 850

 61 grelr  65
851 QNTSY 855