Protein PF10_0040 (PlasmoDB link) - New domain XPG_N (Pfam link)

Sequence and domain localizations (colored) at: 1...102 

   1 MRVRRLQSYLTENNLLKKSSLENIKNLTLGIDALYFLRICSDLKDILSDVSGCISPCIFH   60
  61 MIDKQCEYFKKWDIKIIFIFDGITPKGHKLFSAHYHQYIDEGWLYYVNDEKKLSQKSFSE  120
 121 VNNICNSDISFLLFHYLKYKGYECIYAPYLAISQLAYFLEINLVDIVFGPPTLGLHNVTK  180
 181 IILNIVWKKNYFEWIDILYLLKMWNINKEQFIDACLLAGTEYCLTFPYLNLSHFNNGYKQ  240
 241 FNFGTSIEFIKQSPLICYLQHFPNDELRKSHMNAYCLCKSMLKYPLVFLCTGQVNCFFFH  300
 301 SNKDQKCLQKKCDASILNDHTGHNEDGDHVDNASIKKKKKINKKDIISTSDEQNDDSDCS  360
 361 IYNKSSYDKNEEDKFFNNKYNRTITNISTNDCIKLSKDGYLKGDKILDKREEDTEQNYHN  420
 421 SKISYDSYCEQDKKDNTIEHPEVAKEKGKYKNSKLIYEHNSDNSKDRKDTNEDTVMEDST  480
 481 KHIKDIYAKENYKENDIYKKKNHNNDKENISKLVPKDYIKVVGAKFPTCVYYLMSIGLLS  540
 541 KKLLCVLAMGEWIDYSHPIIDSFEYRDTLIDLREYRCRILGLVSIKLNPFFYKRKVKFFD  600
 601 YGYYINNIMDKDNKATYLNILFNDNFLWKINKDNVSEEMNRQNVKNVDLQFVLRWHLYSE  660
 661 SKSISLVAKKCELYDEDMKERKASNDKEKDIYELESSNDNNRGHNNNSDDNNGGDNNNGG  720
 721 DNNNGGDNNNGGDNNNGGVNTNGGDNNNGGDNNNGGDNTNSSNDTNRSDDDNTDPSNNSD  780
 781 YSSNDVDNYEDDDYNNYSDYCKKSNEHTKRKKKYMHYNKHMIYKYNSYYKNILRTNNQNF  840
 841 HSFLCLVYFMFLENLDIFTKNCGVTLFGLLLSEVKNKNIDSNILIIFELFKFGFLTTEAL  900
 901 LPPDGKTYPENAYASIQNNNKLDEQDKKSVLLLSRIYSLYNSNIDHSRTYEGLIDFDLCA  960
 961 FFAVVKIIKKTLRQLLQACVTNVLLTNMELIHILPENLYNPFDIHICGFFVTNHFMGVLI 1020
1021 KYFLLFDFDDIQNEKETLKRTSDKNMESNKMNNDIETMNDHLLKDKLENQKETEHLSKNN 1080
1081 DFKGYDMTTNNHISITQPNKKNNDHINMKEINDKFYTNEQPEDKHMKVDKNQKYGINQVE 1140
1141 HKDKRSLIELENNDKNIIYKENYNENGNNSYVYSDEHNLSDDSKTNNYEATHKKHENNLD 1200
1201 HKKKEEYKIDEEYCQTPINDDSQNNFNVFEKAIRKKFPSFVNPINDLCNAINTWRDHLCL 1260
1261 ITQLEQHTNVYDLVSDLKAADNFLEKKISYIGLDKSQTYNRICLSNNK 1308

Alignement of domain consensus (first line) on the sequence (colored line).

Each position reports the amino acid with highest probability; capital letters mean highly conserved residues (i.e. with probability > 50%).

Occurence 1...102 
  1 MGIkGLlpiLkpvaairsvsiEalegkvLAiDaLyfLkavRqlgnnlenEeGettshlmg  59
  1 MRVRRLQSYLTENNLLKKSSLENIKNLTLGIDALYFLRICSDLKDILSDVSGCISPCIFH  60

 61 lfsRlc.rLldfgIkPifVFDGgapdlKaetlqKRsarrqea 102
 61 MIDKQCeYFKKWDIKIIFIFDGITPKGHKLFSAHYHQYIDEG 102