Protein PF10_0079 (PlasmoDB link) - New domain AT_hook (Pfam link)

Sequence and domain localizations (colored) at: 2983...2995

   1 MMERGRSNYRRNNENNNFREGNIKNETGDDNHFWTNIDNYYFCNFDKSIISAFENHIKCT   60
  61 DYICNKIKKRKINKKLFKNINCYKSSVKIKLNGNDKNEHNNKKLVCAGTNMQYDNYMKFN  120
 121 ENNMNNVNNVSNMNNKNNMNNMNNMNNMNNMNNMNNMNNMINMNNMNNMINMNNVNHMNN  180
 181 INHMNNLNRMNNINHMNNINHMNNINHMNNINHMNNINHMNNIKTSENYNISNNNNKCIQ  240
 241 NNNINDKILNNQIQNVMTFDDKKSILEFMPMAKNELLLNTLHHLNLRNEHPTNPFPNMYR  300
 301 NPNYFNKDENYMFLKNQGPINNLNNNVLPNNNNLNNLNTHVNNQMVENNNKTMPIPLNNL  360
 361 NAYTTNNNDNNNKNNILLNNNEHNNNPVGGTNKLSDKNLEFLQIEELHNKEGNKNTNDQQ  420
 421 VILKEEERDIQVNSNNEKTTNEENILLNDLQKNTNNNETSNDTTPFKDVNDDINILKEEN  480
 481 EKENVISNKINSINLAHSTIQNDNERINNEDNKNKENVTIQDNYSNNNNNNNINRGCVLN  540
 541 KNQNNINSMNNINNNNNNNNNNNMNNFNNFHLNQNVPNNDMFKQPLLFNKPNMMNMHAYH  600
 601 MNNMNPSEPPFFNGPIINNNKQSVQGYINPMNHNMVNMYNSFNPNMRNDIMNKHMMITPN  660
 661 NLNINDDKNMTTDIDKTGYTCPSNMLPYDNMLINNQFRVKDPHAFMRKSHETRIRKFNEN  720
 721 DIKDDNNDDNNNNNNNNVNLDKYKRSTRSSKYDDNFFNPFLNKKYDGLGKLPYIQNKPIP  780
 781 NGLHISIYIPQSYDFTDEVKDQDIKTYEDTNKNNDKVNTICDEIKNTEHTDHEKDRKSVS  840
 841 FEQEKSELISNEEYIYERETLARLLTEITFGDKKNLFNPKMTSENKEKCYNTILNELKTY  900
 901 KSLPIILGNILPYWTKDKNIKKIKKSIEKMNKRKKKVDNPQKYPNLFYKIKNLKRNNDKL  960
 961 KYIHISNINKKIKRAMMNKQNKKKQNYVFEDELNDLNQINVKQEKKDEYDRSIKTENNES 1020
1021 SAKLKDNMNNSKNNSQNLTNTDIKVKNENKDAIYDDGHNNIQNVEINNKNKENNYYTHNN 1080
1081 VQGEVLHNYKIDKDDKNENKLNLIYKNVDNEERGKNESKNVDSFDEHIVINKNNNIEEKD 1140
1141 TSSFEHNEKITTSIINNDKNEELNKEDGYIYKNIKGNDTIKDGENYIPQDINDDEYDDNH 1200
1201 NDQVKVQDKCINYKENHKKKGALKKKRNLLSKFDFLSNFHFDMPYNSSVPFNNSMFSLQR 1260
1261 NQYKSCVYFEFVLTNINLDKYRRDILNVNYNNNNTITKRKNIYCINFKKYYKSLQRKRKY 1320
1321 INPTNNGINSNTDNINNIKSPINKSSSLCNNNIQNKKEEVNLTCNMVINNNIKNDSIISS 1380
1381 LDVNKNSYNNKLREEKRKKKKKKNFMLIKKKKYMEHVNDIFGISNINNISKANIQNYENI 1440
1441 ENINKEIFVLFSRYVHNIKQQKKIIGKLIGNIKSEKKKPYKYWYSIEDKMINFYINEYLK 1500
1501 NKLNTKHTYTISKQIVDLLKLRLLINHSSLLPNSWTEKALCNICNIGEDWEDNPIVFCDC 1560
1561 CYTPMHSFCSGSKNIKNYNSNKKETTDDEDEQQDQHLQQKVEKDKDKDHNNSTNVYIKNQ 1620
1621 NNFIKDCYSHDHRHGNKKKKKDDKINNKNNHKKKNKNHMTPKMNFNIMEYLMSDNYIHIN 1680
1681 SPQSCFNTLTIKNELHESPGNTYDSNDEFLSKHNSNENLNINHNNYKKEKSDFVNNKSDD 1740
1741 NTNNNKNNDDDDDNKIVHDNDHNDGNIYNNRNSSFMNSLNNHETIINKNNIDEGNINDIL 1800
1801 DKDKLYIEENKTSVQETSKSIKNHNVTTGRKETKGTIQKKDTITSSKTNKNKELHEKNVD 1860
1861 EEQWICPLCSYLRSQIFFIDDVNAFKIIRRLCCPRKKKDIDLLFKSTTNEYNINTNHNNK 1920
1921 NNHNNNSNCNNNIIDDLKREMNSFNAPEEIIVNKEILKLTHKKKSIVLLFDTQNDIQYYK 1980
1981 EKYNIEINDAQDFFEKIVLKYKEKYKYITLFNSIVVNKIEGSLNMYEYIYKNFQFFRQET 2040
2041 FCITEYVDDSDDESDKEETNITTNVKSDKKKKDFDKGNKMIKEEKIDRRTKLYRLLQSKL 2100
2101 HKKEDRRRKKFRNRNKLNINKDINKNGVPNIQVEIKRRGRPPGSTKLSKLLLQNNFPIKS 2160
2161 DNIVNDNTSCKNITNNDVTSNILTNNVITNDNITNNIITKDIIKNDSFNNTIHNSDIYTN 2220
2221 NNQIYNNTNIQNNTSTNTTATNITVTNTAATNIIGTNTDSTNTACTNITTTNTNDNNNDN 2280
2281 NNINNNNNNNNNNILPNYGALIKSEQNNSLADNKPMYGMKRKKSSDYNCVEKKFNSNNFF 2340
2341 LHNDTKLRNHIFSTYNDEFEENNLLLKYNHNKNCSFVFKIPTCCICEFDAFYIGGGPIKR 2400
2401 TKKKNEWCHIRCALISNCIINNKIEINNKEKTKYKCSLCLRTNTTGIIKCNVPDCYKYYH 2460
2461 ISCATSSPKYLIELNDENKLILFCSNHSQRKAPTEILRRYQILREKEYNKNKLEDKLNIS 2520
2521 KMFDAYLLQSYLKVCDFKLFNLLSLSSLSVFDKFVHFNYDKFNEHVKKYNINLMDDFNND 2580
2581 IYQNVDHNPFLKEASNMFNNTLEVTKVGRTRRRSSNGSNFIKRDQRDDKLEDKLEDKLED 2640
2641 KLEDKLDDKLEDKLEDKLEDKLEDKLDNQLDDNELESKEHSSIHLYQLSDVNQKEEKIGE 2700
2701 SENDYEGEREFLELENSNRKKNVQIDIFDIENINRISNIKCNNIISIGNFKNIYNENLLD 2760
2761 EDTLLKLLSYDFLNIQKDIQEFNSNILSDKYKKLKNFENILCLYPYFNDYQLRKLSELIL 2820
2821 EKNSSTLCKINKDDDNTFISSFNKFLSLLNNKDLMLCSVCLSKASYSDKNKEEKKLTEEK 2880
2881 IHLSTVENNNLSNSQMTLKLRKLAYANNIKESLETKKERRLGSLSVLKKCTMCNVYICYF 2940
2941 CCHRMNIDIMKNYLNNDIKLYNSFSAYNNNINKNNQDKNPFRVKRVGRPSKYRPPIEPPP 3000
3001 NPDNINSNNNNNNNNNNNNDNNNDNNNDNTINNNDLKIDDKENKTNISQENITNNNSTTN 3060
3061 NKTQNNNYTNASSEQHTSNNHQNEVEDENVKKNNIEHVLNDRKNVQINDNIKEQSNLDNN 3120
3121 HNSSCTKNNDIHLNDNINYNNEKTLVENNQICKTKRTSGGIFKKSIDSSTFLNCDKKEND 3180
3181 NEFVCPRCEYFKVKKKIGFCSYCPRLDGFLNCFEDKGKKELLFGHPKCMEYVNTAYAKKN 3240
3241 SVNDVKSGYNKRICSYCRIKHGVVITCSNTDCDVSFHISCGILLGCKMDNFFGRVDIYNP 3300
3301 KKAYCFKHTFQYCKKSNFLNFINANKLFCFENFLYNPFNHLYNFLIGTYVFNHLNKKCSI 3360
3361 YLMKPIKIEEQSFTNIFEKTQLNILKKNTNMLTNDMKRSPKGNNKYNMDNRKKMSLINNM 3420
3421 NDSKNLLDPSSLYNNDYSNNNNIHKYIKLSNEDDNSRTPSNTLANMPFDIQHDNINSFYS 3480
3481 MNNMNNVHPNFGSKFNNNPLFLANKNNMHNTNNPLLNLDHEHNKQSFMNTNNNNVPFKNN 3540
3541 NKIFVDDNLTESAVSILSENETEELKSFQNVSLINSRSNPYINNIIQNSFMQYVKKFQGN 3600
3601 NTMPQPFNNNAIPNHFLPMYNMFNYPNAQYQNMQNVQNMQNNIMNRNAKFNFIENKRKKY 3660
3661 LYQDKNVENTRKNALSEGNIYANVDNGKLQKVDGRKKRRYHKSKNTQSINTGELTTLTNS 3720
3721 NSLSINNMDKFNKENISSNMNNNHNPFVKNNIMEEKNINAKNSFFNDSNTNILKEESKVN 3780
3781 IKKCEDTVDEEQIYCPVCKSYYEELSDGSPADGLNWIGCDKCEKWYHWICCKYSVDNPPD 3840
3841 IENDWYCNSCLNS 3853

Alignement of domain consensus (first line) on the sequence (colored line).

Each position reports the amino acid with highest probability; capital letters mean highly conserved residues (i.e. with probability > 50%).

Occurence 2983...2995
   1 kRkRGRPrKaata   13
2983 VKRVGRPSKYRPP 2995