Protein PF10_0128 (PlasmoDB link) - New domain WD40 (Pfam link)

Sequence and domain localizations (colored) at: 222...258 / 262...374 / 651...692 

   1 MSIISNIEIDMKFFDFYEGDKSVYFCKEYEAFLCLCDDNLYSFKIDEEKNSKYSSLYDIL   60
  61 YPTCILESSVDIDDIKENYQKKYLNKRCISLFSSIRYYYYCDNNVFLSTDDNNIHHYVLV  120
 121 YNNNNIKGNDTYDDDIKNGEGVNNNNRDIYLYERKEDIEGGGNGNAYSYSYNWIYLEKKK  180
 181 IWKSENIVVSCFYYKDYDDDDYKKLIVGYNNGLINVYNINTYKLKISYKIHNTRITNLKF  240
 241 YKNFIISSDVTKNIYIYDIIKRERIITCEDHMGGIIDLLFLEVPNGKNENKAQQNEVNKD  300
 301 GIMINEEDDYISNDESNNDSDIGIIDNNNNNNNNNNDKNDNHYNDEKKKLHEKNEEKLIG  360
 361 FISIGNDKIMNIWDLNILNSYNEEDMNNLISNNNLSKKKKNKSNKFNKNNNLLKFNPIKQ  420
 421 FYLSSDINHAIIIPSIIFQNENNDEKKKKKKKFIITDENIKWLILTHDNDGNLLFYNPIK  480
 481 GDVIYKYKENINTINPSNISKFFLLKYFLYIFREDSSLLIYDIRYFKLLKNYICKLEGIF  540
 541 EILFFNTNSEQLTCDQKYSIHNKHADEDDEEEEEDMLYKTSNDEKKKEKKCVILLGDNII  600
 601 RILRFKNNLISQRLLIGHEDIVSCIKLNEKNLLLFSASNDKNIFIWSLRNYYCLYILKDN  660
 661 LYPINAIDVNIKHFPSITLVSVCEDSSLRLWKCTIDEEKLKKNKSHNKKRKLEDIFDNKE  720
 721 SIQSTLTIYPHKVLINDIAISPNCKLVATCSKDKTVKIFETQNLKLIHILEGHKKSVQNV  780
 781 YFSKNDNILYSNSYECVRIWSLNNFECLKSIQSLDFNITRVLILNDSCMINGYSNGNISI  840
 841 INIKNCEKLLTTNYHKDKIFCLQSYEDENKNNNIISASINGELIFFKDISDKIITEHVFE  900
 901 KRKNIFYENCLENLLKEKKINESLLICLKLDKKFKFKTIVENYLNYYTFSILNILKKYQH  960
 961 EYGIKQLINKDKQINNNDIIKKEQNFSQMKNLNNNTLIESSMDTQTSININEANQNIVNN 1020
1021 TGDYNNMDNNNFYNIFENSDFLESYIFKELSYMQKKGLSEEAMDDQNVKETEINKSTNAD 1080
1081 NKKDEKNDPSVKHTNNNDSNDSNDNDYNSKEDDNFVLFLKKMKKKSEHSYFLYLNKLMEF 1140
1141 ITFFVVNHRCAYISNFLLNSIIKYIDHEDICKINNYQYFFEVYNSYIPRHKNRYVKSLQK 1200
1201 SKCFELININYYKGDIKMMS 1220

Alignement of domain consensus (first line) on the sequence (colored line).

Each position reports the amino acid with highest probability; capital letters mean highly conserved residues (i.e. with probability > 50%).

Occurence 222...258 
  1 geck.vl.gHtstVtcvafspdllasgSrDgtikiWd  37
222 YKLKiSYkIHNTRITNLKFYKNFIISSDVTKNIYIYD 258
Occurence 262...374 
  1 geck.vl.gHtstVtcvafspd......................................  59
262 RERIiTCeDHMGGIIDLLFLEVpngknenkaqqnevnkdgimineeddyisndesnndsd 321

 61 ...................................sgpllasgSrDgtikiWd 113
322 igiidnnnnnnnnnndkndnhyndekkklhekneeKLIGFISIGNDKIMNIWD 374
Occurence 651...692 
  1 geck.vl.gHtstVtcvafspd..sgpllasgSrDgtikiWd  42
651 YYCLyILkDNLYPINAIDVNIKhfPSITLVSVCEDSSLRLWK 692