Protein PF10_0143 (PlasmoDB link) - New domain SWIRM (Pfam link)

Sequence and domain localizations (colored) at: 1886...1971 

   1 MNINKYEEFYPSILMHERQCGLSSAYIVYEKEQLEILEQEVLKAIIIKALIIEEVIKYIK   60
  61 CILYKIELIKYNNNNNNNNNNNNDNIILTSYDNTNIRKNQIKNVYCPKLLNKNNNIIYDN  120
 121 NLIKDIDRNNFKNKLYIIQFNGNESVRRNFFKTEQKNTISNDNIRIQGNDVIENKNEKIN  180
 181 KSLCNIISNENKEIVLNKKNLDTLMLLEKIKTKTISFINKSSYVVIYKSINDYNNVLQKE  240
 241 LIDISSKCCNNKFQLYSKNINSYSIIDYVTGHINKMKEYQMRNKFLDDIIVKIKDELYIN  300
 301 IDLIYKNKNNKSFLSVMENINYTIVNTYNINQDKLESFKYLHFNFFYICSKLENKSISNI  360
 361 NKYNKVNNNICNIFLYFFVMIFFHLYIQNSDDKRKEDICNNFYNILKYNSYNYEKFYVFI  420
 421 LLCIKCIVSIRNDKLINFVPHNGRKKFSNDDNKELYNDNSTEKKMTIRTGYHFKFNINKK  480
 481 SIHNRNYYFINYAHHVIFNTLYYCIVKGCNIYYKIKKSKEFKRNTYYNNNNYQWTNYFNY  540
 541 IQLYNKCKKINNKYRKMKIIGEIILSKNLKYENNKKNKTGSDRLSGTYFLYNNNKKRNYF  600
 601 IVYYKRYIKRGYANSGNNKQKMFCFKNDNIVLLNKIILYLIDKNRKDAIKKDKLNIKEWH  660
 661 RNTKLYCNSNNAEGGDGGYNNHSNSNYRNNGNNNIGNYNNNGSNFFGNNMGGNNNDNDDN  720
 721 DNNDENNYKPKNTCNDDDNDNDNDGGNKNNSGKYNNSVNKNDNNNNNNSTDGVYGNNVDN  780
 781 VNNVMMNHYGDKIPISNENGYDNNSNVIHKKMVDNKLEGINKSASNNNMINNKVMNSAGM  840
 841 MSSNGDMNYNLNYMNYMNNTNNINMPGSGGGSGVNRMTTVPINHVMNFPNSYMSGANMPS  900
 901 QVPQNMHFDAIENMHDMKQTPQQMKHKTSQLNSSANQGDINNNAKQVGGLPANFMQNQMH  960
 961 PQYQYQQQVHMQQLVQQQNVHGYNNMMQSNNQQKFPNQPGAHKQSNASILKMPPFSSLNS 1020
1021 GDQRSSYSIAQKLPRHVMDTNNNVPSINNNNSSSNNNNNPRHSSSNMPSLNNPNQFNSVS 1080
1081 LKFPYKGSSPQPLNSINNNNNPNQPNQQNHQNQPNHMPNISAQQNMQNVNNNNNNPSVVQ 1140
1141 QMNVNHPIMQHNMIQQNQNNMHNLAPNKPNESQSMFPLGASSNQQGNMQNIASPNKQKMQ 1200
1201 PLFQQGGQQIIAPNQKGINTASISGSISRQPNQGTGQIPISHQNIQQFYHNNSGQMFPQQ 1260
1261 PPFLQRVSTTPQHVPQQQVPYEWMNNPYMHHQYMLQQCQLTPQQLFMHQQKQQNNMLHHQ 1320
1321 QQQQQQLQHQQMQQQQLHQQQIQQQQLHQQQIQQQQLHQQQIQQQQIQQQQLQQQQLQQQ 1380
1381 QIQQHQLQQQQQQQQQGNIPPLSARQSKQGILQMQSQNNISHLPPNLEQHFQQQNISELQ 1440
1441 HHQQQMQNVSAQHSSISTFEPNAQQTMYQGEMFKDSNILQGGHNLEIVDGVNEMQRTNDA 1500
1501 FKGGNIIEASNVSLEAITEEDIFDSNYHCDICNKDITHTIRIRCAECVDFDLCVNCFSTG 1560
1561 KEMKSDKCEHYNYHNYIPIPKYDFPLYKLNWSAEEELLLLDGISKFGFGNWEQVADLVNS 1620
1621 VANITKTDRECESHYYNFYLKSNCAPLPDNKRLLIKPDGNPYEIEHVVEKDINDNDDYVL 1680
1681 PKSKKNNRTQIIGYWPLRGDFDIEYDNDAELLLADMEFKESDLPQQKELKLQVLEIYNSK 1740
1741 LDERIYRKRTVIERGLLDSKAQMQKEKKRTKEEKELYAALKPLSRFHSPQHHEYFIQLLL 1800
1801 EEQKLRQRLTKLQEWKALGLQNIEQVQEYEIEKNRRAKEMVKQESNSTTGIISMNNISSN 1860
1861 NNTVTTEKLGKSLKTSKKDYKIKNKEEETDENKKLNIDTFVALDLLNEKEVEFCKNMKLP 1920
1921 ILFFLLIKRLLIMEVSNSNLNMLKDINELKLKGYKVGQLYDFFLSFDINQKDEFLNNGTV 1980
1981 NTSYVKKNDGKRKKSKNNFDISNSKEIDGKEKLVVDDKDEKNDKNSSNNNNNNNNNNNNN 2040
2041 NNNNNANVDNYNVYVDNNNSGNYSLMTLQGEVLNENEKKGKSKNEDKNKTSNLATKNSNK 2100
2101 GCNKLKSPPKDDMNDINKDAKDIIIKNTNDMILTECVNDKNMQSIFVDNNLESENNDQLK 2160
2161 ENEVKGDELNLTEKELNEHILNTVVVDENDKKGKNEKGKNCETQKNMDSNLLQNEVDMKS 2220
2221 NESLFNEKKKGSIKRKSSIINNLYDKVHENNENVDILENEVKDNVTVDDIKENKEIPNGI 2280
2281 TETFESIENIEEEKDMTMKDIKNDNKDDTKNDCDNEKDDDDYVAQEEILEDDKKRRKKKK 2340
2341 EKKSEYADDKNDELNSIKINENECTSNDIEEDIKSIKSLRKKSYEKIKGFTAHLKTNSNN 2400
2401 KKKTNDNFDEIEKETTVSVNINDSNNRKAKKKTPEKVETNNYQAHVEPLENNSKKKNTKM 2460
2461 RKTSEYSVTRNESKINNNSDVYNDNSITKDDSNIDLDDKPSKSKKSISSTSTVILNKNEK 2520
2521 GKRTKLTKEKATVDIPSNVDTKENDKKMKNFEANLKKKAKKRKGSVSLILNPKKSLKL 2578

Alignement of domain consensus (first line) on the sequence (colored line).

Each position reports the amino acid with highest probability; capital letters mean highly conserved residues (i.e. with probability > 50%).

Occurence 1886...1971 
   1 lkeaaraswldlsalppiEllsepEfflgksgrktpevYLviRnsiilwrlnptkyltft   59
1886 EEETDENKKLNIDTFVALDLLNEKEVEFCKNMKLPILFFLLIKRLLIMEVSNSNLNMLKD 1945

  61 aarrnlagnlvsrvydFLerwGyINy   86
1946 INELKLKGYKVGQLYDFFLSFDINQK 1971