Protein PF10_0196 (PlasmoDB link) - New domain WD40 (Pfam link)

Sequence and domain localizations (colored) at: 458...496 / 505...545 / 599...644 / 695...732 

  1 MNLPVYNMESISECDILKPIDESERIELENKINEQMVELEVKKKYLEELKKRQHSVKEKN  60
 61 NIHSFNNVVEEYPDPNKMLCNFLESLENNTNDNNNHHHNDKESKEQVNDLSIYSEYDYDN 120
121 KKKTTKKENFTYTEQFFTHPNSMDNIMMNKSFLFQKKKNSIPNFNFHIDLFNKQTKNVIH 180
181 IQPKGINYFDKSIQVDLLENNEIYLLDNHINKKINKMEKKENIEKMENIEKLGNIKKTSL 240
241 CYSTEDKSEGDSKSHHKNKIKHTNDTSIHNDDKKKEIKGGNKNNEINKNLEENYNKQNGH 300
301 HNYIYDENNTTFNYNDNKNNSVYVEHNDNRFNAYNNSTHLKSMNVEKKKDEILKSSSFLY 360
361 FLENSSKIVERVLGEQDLFDCTYTYDNNDMLENTQDVDKLKLMNTYYCKKYINGRGITDV 420
421 RTSNIYNELFLASYGLSECSNCIEPEGYVLLWNVTMKNRPEYVFTSESSVCTALFNKFHP 480
481 HLIIGGTYTGNVVLWDIRASLKPIQQTLLTSQGHMHSIYCAEIIGTQNSHNLITADTDGR 540
541 LCNWSLSMFTYPSNTIDLKKGNREISCTTFAFPEGDINTLYGGTEDGTLFQAQIHGMKVG 600
601 IINSDIIHDGPITSAQFHPSLDEMNDNNDLILTSSVDWTCQLLSIKNIKNPLIVFDSFED 660
661 YIMDIKWSPTHPALFSTCSSNGKIKLWNILYDTESSFYEASLDNSSTNKLAWSHDGKRLI 720
721 AADTQGCLTLWNASSEIYQPKFEDLNKFDEHMQTLKAERIADTTSEKET 769

Alignement of domain consensus (first line) on the sequence (colored line).

Each position reports the amino acid with highest probability; capital letters mean highly conserved residues (i.e. with probability > 50%).

Occurence 458...496 
  1 geck.vl.gHstVtcvafspdsgpllasgSrDgtikiWd  39
458 NRPEyVFtSESSVCTALFNKFHPHLIIGGTYTGNVVLWD 496
Occurence 505...545 
  1 geck.vl.gHtstVtcvafspd.sgpllasgSrDgtikiWd  41
505 QQTLlTSqGHMHSIYCAEIIGTqNSHNLITADTDGRLCNWS 545
Occurence 599...644 
  1 geck.vl.gHtstVtcvafspd......sgpllasgSrDgtikiWd  46
599 VGIInSDiIHDGPITSAQFHPSldemndNNDLILTSSVDWTCQLLS 644
Occurence 695...732 
  1 geck.vl.gHstVtcvafspdgpllasgSrDgtikiWd  38
695 SSFYeASlDNSSTNKLAWSHDGKRLIAADTQGCLTLWN 732