Protein PF10_0294 (PlasmoDB link) - New domain DEAD (Pfam link)

Sequence and domain localizations (colored) at: 638...791 

   1 MDCLSKINLIRKVNEELYNSIGVEDDNLSEFLIYLCEKSTSLEEFCKDVFENGGVIEQAV   60
  61 LKYIYNMIKKDNKKKKDHDNEDDVNSKENIFLQNLNYNDNNLEYKKIEMKNEKMKKYHCL  120
 121 TLKNEDITNLVDSDENDKKEKSIKGTKEKKESIEITSKQKKNSDINVTTRDLSDSSYQKK  180
 181 RRKKKNSSGGSSKNTESSFETKDIKKDNKYESGKKRKYDERYYDRHSKEHHHSNKHRHSK  240
 241 EHRHSKEHLHSKEHHHSNKHHHSNDHHHSNDHHHSKDHHHSNKHHHRRHISSSSDSSYYN  300
 301 NKKKKEKTHRDKKNEEDKSYDDYMALKLNNIFNGTINKITDFGLFVSFKTNEGYKEGLVH  360
 361 ATDILPNRKRVVNMNEKFKRNMKVKVKVKGIFNQKISLNMSEVDQKTGKNLVNDDMNKEE  420
 421 DNYISLFDDINEDFNDLKKKNANVFKDDPKETLKYESVIKIQSDYSKWEIQQLIKSGVVF  480
 481 DENIRNEYKNLKIDEKIEDEEDIIEIEVNEKEPAFLKGQTTKAGAKLSPIQIIVNAEGSL  540
 541 AKAITTTSALAKERKEQKQNEQNAIYDNIPKDISRPWEDPKPNLGERTIAEALKNIGKNY  600
 601 DIPEWKKNYNNNNISVGVKNTLPINEQRSKLPIYNLKNDLMKAIEKNNVLIVIGETGSGK  660
 661 TTQIPQYLHEANYTEKGIVGCTQPRRVAAMSIAKRVSEEFGCILGQEVGYSIRFDDCTSN  720
 721 DTIIKYLTDGMLLRETLSDTLLTKYSFIILDEAHERTISTDILFCLLKDVVRKRADFKLI  780
 781 VTSATLDAEKFSTYFFNSPIFTIPGKIFPVEILHSKEPESDYVEASLITVLNIHLNEHPG  840
 841 DILVFLTGQDEINTACEILHERMKKLESMSPPPLIILPIYSSLPSEMQSVIFEPAPPGCR  900
 901 KCILATNIAEASLTIDGIFFVIDPGFCKIKKYDSKRDMDSLIVAPISKANAKQRAGRAGR  960
 961 TGPGKCYRLYTEEAYKNEMSEMSVPEIQRINLGSIVLLLKALGINDFLHFDFMDSPSVET 1020
1021 LIHSLENLYYLGALDDNGYLTKLGKKMANFPMEPNLSKILLTSLNFNCTDDVVTIVSMLS 1080
1081 VQNIFYRPQNKALLADKKKNKFIMPQGDLITYLNIYNKWKENSFSNYWCHENFIQSRALK 1140
1141 RAQDVRKQMLSIFEKYNYQVKKSTSKNDATKYVNICKSICSGYFNHVCKRDTQQGYTTLL 1200
1201 TNQQVFIHPSSTLFNKNPLFVVYHELVLTNKEYIRDCTIIQPQWLIQLAPNLFIPADEKK 1260
1261 ISKIKLREKIEPLHNYYEEPNAWRLSRRKG 1290

Alignement of domain consensus (first line) on the sequence (colored line).

Each position reports the amino acid with highest probability; capital letters mean highly conserved residues (i.e. with probability > 50%).

Occurence 638...791 
  1 tpiipaileGrDvlvqApTGSGKTlAfllPillkkkkdgpqalvlaPTReLaeQiyeelk  59
638 NDLMKAIEKNNVLIVIGETGSGKTTQIPQYLHEANYTEKGIVGCTQPRRVAAMSIAKRVS 697

 61 klgkellglkvallyGGdsikeqleklrY.rkgvgTPgrLldlllknlkllVlDEAdr.. 119
698 EEFGCILGQEVGYSIRFDDCTSNDTIIKYlTDGMLLRETLSDTLLTKYSFIILDEAHErt 757

121 ll.dmfgddleeilrrppkrqtllfSATlnvedl 154
758 IStDILFCLLKDVVRKRADFKLIVTSATLDAEKF 791