Protein PF10_0362 (PlasmoDB link) - New domain DNA_pol_B_exo (Pfam link)

Sequence and domain localizations (colored) at: 702...936 

   1 MNLAEKPKAFFICKFLFFYYIYKKPILPFDSLKCKISGKEIPYVCIIQILGLSLLGQRVC   60
  61 LYIHDLMYVYLIVYFILFYCFISFYFIFFHSPISDDKLEIELCSFLEEEYGKARKDPSNN  120
 121 VCVYNIERVKRKGIYGYNEECDDFLKISFLYPNTINYFASLLKKKLFKKRIWDLYEVHIN  180
 181 YMLHFLCMKNIYGCSEIYIDKNIYFRKEFVNEINFECIEKEERWYLGEKKYNLDNFKRNK  240
 241 YLEVDAPLVFTIKTINVNFSSLKRETTYDIECDIKHQHILNEKIYTYEFEKNKIKWKKEF  300
 301 NFDLPINHLDSFAKMWMKEKKRCKYMDMDLKRELFYFKSYENDLCFDTFDVLTERTKKMF  360
 361 QGFLEFMKRMQSEKDKVNYEQILEYDNIENVKKYNKVINDDMKLKEDHNFNSDMNNIEVN  420
 421 IKQINNNDNINNCKNVVDNEEENDMLSNMISNKKKDHMGISPNLFIQNKEQEKEKQDERE  480
 481 KEKQDEREKEKQDEREKEKQDEREKEKQEEREKEKQEEREKEKQEEREKEKQEERECFIE  540
 541 YVNEKGCIASFEINKKRKDVVRYSFKKEPPRINKCYAVINNLVDHISGRDNKNMKEKMKG  600
 601 NIYNRIHDNIEDENKEDTSKFEYIGKENHMENKENIRKQYEQIKSDNMKKKINIKYGNIF  660
 661 FLEILTEIKDENCYSSDYNQDKIKAVFYIVREERLMNLYEDYNNCMGIIATKPFPNISYL  720
 721 FNESEDMNNLKGTNEVKLNESKLNESKLNESKLNEEELKLCKDMYHIEDVNLCTNNCRSI  780
 781 EKNRDNLINDKNVINKKNDDTYGSSKELCCSKNGYHTNKIIKEITNNDIKKVKRTFFDFN  840
 841 INYNNVNICIVENERELIQKLINKILFYSPLSIVSYENDKYNINYINQRCLALDIGNFYK  900
 901 MICKLNDQKKFLDLHNAYSRNIKGIIIESLYKLSNTYNTSFENLCKHYLNINIPSINKYT  960
 961 LYYWYNYNTKRKIKANGSSTVVNKDIINNDLWNDMDEEHIYFPYRHITIKHYLRKVYFIL 1020
1021 LIYDKICFLKRKMNFCKYIHVDLLSLINRGSQYIIESFLLKMSIKYNYVLYSPSNKEIFD 1080
1081 QRPILHTPLILQPKSSINFFPLLVFDFQSLYPSILIAFNICYSTCLGTITLKRKLNQMDE 1140
1141 EKNNEKKDENIEGSLMEKCETYKNGINDKNHIYDKNELSCSNKNDLPSDEYTDMMNISED 1200
1201 AKYLIDLLDENINDCISSADPMIEPDIIQSNGKGLGENIPSENMITEDHDKIKYKLDMNN 1260
1261 KLEMGNIKHVNIMNEQSIYGNINKNKLYSNEEKSLESNFEFIKLGVMKNVPSISSRIKNL 1320
1321 KSEDIIITSNNTIYVKKHKRKGICPLFLEDILKTRIMLKRCMGMYEERVNKKLNERMGKL 1380
1381 KLILNVATGYIGANFSGRMPCVDISESIISIGRNFLLFIIEYIKENYKFVKILYGDTDSL 1440
1441 FLLNETTDDIQSSFKLAYEILNSINNILPLPMYLNFEKIYCPSLLLTKKRYFGFSFKNEN 1500
1501 QDNPILDLKGVESIRSDQCILVKNILIQIYFILFYFKNNCYFSYCCCCCYLCKNFFSNLI 1560
1561 CSCKELNVHKTDPCFLFTLLKIVLSICKVRRYINQNEDKYNINNNNNNNNKSNCHHNKQN 1620
1621 GNKINDISNLSLELYRKVPSFDKVKLYKEVMNWVEYYDNENLLLKTLNFLYREKYSFLIY 1680
1681 LFNLFDEATLHKEIEKIIQTNFEKIQNQKNNKCCFINPSNVFKSCLCVKNINENIKCDQI 1740
1741 RCYCNVKQAMFFFYNPTYNKVDYVFNTKLFYSHLLSHIRQTLSEYFNKIYDNQISCDNFI 1800
1801 IYRKVKLGTYKGEMQGIRRKVSLPPQAIVARKIMRDFPNSIITYKEKVPYIFTKKLKDDK 1860
1861 IYSSVSHPHFIRGIYRSFRFDCGSTEQLEISEDNCNNDSEKNGDIEKNDNIEKNDNIEKI 1920
1921 GDIEKIGDIKKIGDIEKNENIEKNENIEKNDNIEKNDNIEKTDNIENFPSSEKSEYCDIS 1980
1981 ENEEKSENFKNSDMSEYCEYDKNELLYVDGMMEIEELKNRILGINIKKKMKKKKKKIKEI 2040
2041 NYDYYIQNLIIPPLKRMLDLLPFCSLNLDEIFYRTKRKFNWNKAKLEMFSKYYKNMDNKL 2100
2101 LKNNNVTNKGINLMNILNEDKINNKEQNGNTKKKLNFLHNVNRTMETYKDMNNKSKIIIR 2160
2161 LEEQGENEELKVTNKIMNSYVEINKSQNMLKKLNKICLMCANSEMEALACNYSVHCKIFF 2220
2221 KRINLQENILKNKDSINRLS 2240

Alignement of domain consensus (first line) on the sequence (colored line).

Each position reports the amino acid with highest probability; capital letters mean highly conserved residues (i.e. with probability > 50%).

Occurence 702...936 
  1 ktdeggsvcvnvfgfkpYFYvatpegseakeinllkelkdleres...llkkygilifki  59
702 YNNCMGIIATKPFPNISYLFNESEDMNNLKGTNEVKLNESKLNESklnESKLNEEELKLC 761

 61 eivekgydgppksngykvyEydvdyltRDngWykvkkgdcsvsdlssctslkgenekDpI 119
762 KDMYHIEDVNLCTNNCRSIEKNRDNLINDKNVINKKNDDTYGSSKELCCSKNGYHTNKII 821

121 iqIStnesdpierflfTlktcangvevyefpsEkelLqaFfefirqydPDvitGYNidnF 179
822 KEITNNDIKKVKRTFFDFNINYNNVNICIVENERELIQKLINKILFYSPLSIVSYENDKY 881

181 DwpYilnRakilglkmtpeygvrkgfpskqggtgsrekvkisGrihrksYkLnaV 235
882 NINYINQRCLALDIGNFYKMICKLNDQKKFLDLHNAYSRNIKGIIIESLYKLSNT 936