Protein PF11_0056 (PlasmoDB link) - New domain WD40 (Pfam link)

Sequence and domain localizations (colored) at: 116...153 / 220...256 

  1 MEFRRYFSSEDYIFEIKNNEQLFVCENVAKNIKPLWSLKGHRNSIEGLHLLDDERFCTVS  60
 61 HDNLVSLWRLENKQNIVNIKFDDAILCSSYLKKNKYLCIGRTNMNNNINIINMDKEEIIE 120
121 SYKSECNSIFCINYYDDNKISYGSKDGSICFLDLIKKKNIYRYEEIGDCINYCTSSFSDN 180
181 CFYNSNINNNNDTILMNPNFHIFSTYKGNILFFDLRCMLPIYQNNNLHSNYSVNCIYCYN 240
241 YFLYSGASDCLIKKYDIRYIDENKPLDIYVGHTSPIRYISFSKDFSYFTTSSDNGSIKLW 300
301 SVNKKKEENENKIYSSFNNLISPSSAFSFDLDSPVNDSLKVKKMNMKNKEMPDKFVEINK 360
361 QTKNKTIKQNKTISHNNNNNMRSSSIISDTNYYVNNLYDTTQKKKERKNIFSKKYENILL 420
421 EFQKKKRTITPNTILSISNEKKKKVQAVSKNELFNMCKMNKTQVDKEKEKKNYKGQFFLN 480
481 QSVNINKMDNILMNSKKNQSIKEMDILKNKKRNDQLKTNIKNKLHIPSPMQYTNTKGDKT 540
541 YKGKNERSYLKRNISKDTNKYLNIQSPISNKFNESDYRSFFYNNENVINNLYPSSQKVKI 600
601 KYANLSMLNHKGRVTSMEWLGDLLFSASWDQTIKCWNVKKYLME 644

Alignement of domain consensus (first line) on the sequence (colored line).

Each position reports the amino acid with highest probability; capital letters mean highly conserved residues (i.e. with probability > 50%).

Occurence 116...153 
  1 geck.vl.gHtstVtcvafspdpllasgSrDgtikiWd  38
116 EEIIeSYkSECNSIFCINYYDDNKISYGSKDGSICFLD 153
Occurence 220...256 
  1 geck.vl.gHtstVtcvafspdllasgSrDgtikiWd  37
220 PIYQnNNlHSNYSVNCIYCYNYFLYSGASDCLIKKYD 256