Protein PF11_0222 (PlasmoDB link) - New domain WD40 (Pfam link)

Sequence and domain localizations (colored) at: 139...175 / 330...370 

  1 MATASADHSIRIHNLKSLSTIKELYHKKCGHYDWVSEVFFTKRNEVLSGGLDGKLCLWNT  60
 61 IYCCKIQKINKMMNCSEYLEQRKKVKEVKFKASNNVITCKEMCAHHSTISDMKFDKQNDK 120
121 CITSSYDKTLKLFDIRKFRELCIYKGNHTCPITKFLWLQNKIISADKNGCLCVFDVETSQ 180
181 EILNAKNTHTGNIGALNYFYLYNKTEKKMINNNPNVDHEKRIDKSLPFSSISSNDIKKNY 240
241 SLKNKNNNNRDKNNQHNKREDVNYDVIYDDNCDDNIVKKNSNRNINLIRSDNLFGQHDNY 300
301 LNLNNEKIPLIITGGQNDGILKVRDFRIFHKYVSYKKIHTASINSIITYNLNNKTYIISC 360
361 SADGYCYQFEIQSICSSNLNNYLKKICVNEPILSARYVGNHFILVGSSFGNLFLLDFSDC 420
421 SENTLTKQPKNIASINEINTNSINLSDKFNNPLNEKKSTNNDILWAFGACKKGGINCIDC 480
481 IFVYDSKNKNTTEFEMYNIITAGDDGIPCFLYIPNSYI 518

Alignement of domain consensus (first line) on the sequence (colored line).

Each position reports the amino acid with highest probability; capital letters mean highly conserved residues (i.e. with probability > 50%).

Occurence 139...175 
  1 geck.vl.gHtstVtcvafspdllasgSrDgtikiWd  37
139 RELCiYKgNHTCPITKFLWLQNKIISADKNGCLCVFD 175
Occurence 330...370 
  1 geck.vl.gHtstVtcvafspd.sgpllasgSrDgtikiWd  41
330 HKYVsYKkIHTASINSIITYNLnNKTYIISCSADGYCYQFE 370