Protein PF11_0329 (PlasmoDB link) - New domain ubiquitin (Pfam link)

Sequence and domain localizations (colored) at: 181...252 

  1 MANSMEKNEKEKVDVHTNNIDLNEYKYVINNSHSSDEGEEDVSSYDENDNEEYTNDELIK  60
 61 EDDSNNKRNKVLDTNKYRNNDIINHNINGRNGLINNNEDIKDISEGTMNKEDSLICDKDK 120
121 EENVEILNNKKNEKYNNNNNNNCNMFNKDDNICVKKNREGYELNHKNKNIVDNKYIYVRL 180
181 KTNDCNNNIYKCRIEKNISVKKMKKGLNKILNNNNDMNYRIIYRGRSLKDIDEIAKYNIK 240
241 FNDIIYAIKVHKKKNGNDVTLDSGITSSQLSTLNDEYNEYGKYGQNDGISKLISNMFDNS 300
301 DFIKSIMDSNKQLKKLREQNSDLNHILNDSQTLKQSFEMIKNPSLMKELMKNTDRAISNI 360
361 EAIPGGFNTLRRMYHNIQEPMYESTEKLIEKKLNKVKHYDLNSTSPPTSQAFPNPWASKN 420
421 TKNKNSINNKNNYNLNNFEKFFQTNEKTQNFKSNLSTDNNNNNNNNNNNNNNNNNNNNNN 480
481 NNNHTNSLLNNQNKLFFDKNKRGSNNTSTNNNTTHNIMNNNNLNDLMNNSFLSNSLFPLL 540
541 NKLQLPQTNKNVSNNKNVINGNNDYQNNLTDEYKNSTQHVHNLAHTNKNQNDTLSTNRLT 600
601 NNNKDNKLDETIENSSNMLNNLLMSMNKNLNMNSTSPTNNTSSDLMNTINMINSLSNLGN 660
661 YNTPYGNIVGENTTTNNSKNYAHNNNNKDNNIDSASGSIPPYYMDQSFFMEAMNFLRNTT 720
721 NNDIVNNNNNNNNSSSNNNRFNNALFNNTPLNNNFSNFMNVLQNVGAGNGYIPSGRTNNT 780
781 NENQAPRTIENEIKNVEEKQEGIQDTLKSTDILNIKNNDTNISNNINGEANDHNIYSEQL 840
841 NSLKGMGFTDVEKCLKALIKSKGNVEGAIDFLLLDESNVNES 882

Alignement of domain consensus (first line) on the sequence (colored line).

Each position reports the amino acid with highest probability; capital letters mean highly conserved residues (i.e. with probability > 50%).

Occurence 181...252 
  1 KtldgkgstitlevdpsdTVlelKekIeekeg.ipvdqQrLiysGkvLeDdrtLseYniq  59
181 KTNDCNNNIYKCRIEKNISVKKMKKGLNKILNnNNDMNYRIIYRGRSLKDIDEIAKYNIK 240

 61 dgstlhlvlrlr  72
241 FNDIIYAIKVHK 252