Protein PF11_0330 (PlasmoDB link) - New domain RRM_1 (Pfam link)

Sequence and domain localizations (colored) at: 909...987 

   1 MKEDNINNDISLDEKDISRQESLFYDTSIAHRNIKPFVRPPICSVSTATDSFRCSTYSNP   60
  61 NYMTCPYINSYENCTENNKHVDGLREKNGKYKKCEEDDKKDLNYMSDNGYVDPYNIYRIE  120
 121 KKDDIYFSMFKNEESNIKNKESNHNNSKYPFDGCTKDLKIYTNVYEDSKNFSSLLSKDSI  180
 181 YHNSISNNHMTNKIPFYNKENLKNINNNNNYYYYNNDIKMKRNTINHDEIFKPIAYEKNG  240
 241 INIINKQTYDTYKKDEKYPYLSYDEKYNDMMIMLMSGLNIKDNYNNICDNNNNKEEENPV  300
 301 DHKNIQDVNKNENYFKDYISDVYHNLINENINNNKEINNINKYNIFNNYIDNDNINSDDN  360
 361 YIYMNRENNQDVNKNIFSFCKSNLNLKKENNNIYDTCKVFINKDYKEDILGNNNIEDILG  420
 421 KNNIEHILDNNNIEDILGKNNIEHILDNNNIEDILGKNNIEYILDNNNNIEHILDNNNIE  480
 481 DIPYNYNQAYILDNNNNIEDTFDNYHNDNTFTNDYFYNLKKGKKVSFDININKNKIIDHS  540
 541 SSINESYPFFLQNNIKDNKKNSLDNPCVDLNIYPNDLNEVILHDSEDKNILIDDDYILKR  600
 601 EDVIIDEKENKRPDVDTNKNSIIQKEENIKDNINEFILSNNITHKNDYININNIDDEKMV  660
 661 KGFHKKEIFAHIKENDDKNNNNDNNNYMDSNNYAKNNCNTCYYNYNNGWCDKSSILSENR  720
 721 ICNYNDIQYNFSSNYSNNVIYPLHNESNIHGENSPLAYIKDEEPLVFVNDEYDNKNKLND  780
 781 MLCLDNCLCDSCVSINEELLSKEENNKKNIFENMKTYNFLCNLLNDKQDEDFRDNNNEYI  840
 841 TSQSCFEENNNMNHTYDNYIFDNINEEYDNTPFKENIIYPENYNNILQHKKKDKDIIIKK  900
 901 KKSLAKYTLIVNVPPNTTRKDLMNVFSQFGNVDLTMVVCDKESRHPNKEWTATSGYSFVR  960
 961 FSTNIEARKTLTAATCGLIKIRGSKVRATWAKKDSYSKKEKDDIVLKIPSSILIINIQEF 1020
1021 NCCICKIYLSYQPILFPCCFVSSCSDCLANYIMNNINQPNFKCPNCNIILNDKIIKLDKN 1080
1081 VKGTLALLYKYYSNIKVKCPHNGCLWIGYQYQYLNHFISCKYNITHQIQT 1130

Alignement of domain consensus (first line) on the sequence (colored line).

Each position reports the amino acid with highest probability; capital letters mean highly conserved residues (i.e. with probability > 50%).

Occurence 909...987 
  1 lfVNLppdtteedLkdlFskfGpiesikivrDretgrsk.......GfaFVeFedeedAe  59
909 LIVNVPPNTTRKDLMNVFSQFGNVDLTMVVCDKESRHPNkewtatsGYSFVRFSTNIEAR 968

 61 kAldaln.G.kelggrelr  79
969 KTLTAATcGlIKIRGSKVR 987