Protein PF11_0385 (PlasmoDB link) - New domain RCC1 (Pfam link)

Sequence and domain localizations (colored) at: 149...203 / 206...257 / 260...316 

  1 MLKIGNVVKNKRCFLKYDVKFYSSKKKVETKKNKEQKYNLWRWGCPGDSLFSSIKVGEKN  60
 61 KMPEKLSEFENVNIEKISAGCNHSAFIIDGKIFTYGLNDKGQLGRTLDGNEKSQNYSLIP 120
121 KEVKTNEDIKFTNVCCGYKHTLAIDENNELYSWGWGGNLFKGANGLGQGNKNNINIPKRV 180
181 ETFKNEDSEFINISCGEQHSLALTKNGKVYGCGKGEFGRLGKGNHGDQLFFEEIDYFVSN 240
241 NIEIKDISCGHSFSAALSKNGDVYVWGRNDYGQLGIENSIGDLYSHEVYPNKVKYFEIEN 300
301 IKIKYIACGDNHMIACSENNIIYFWGSRAWLEPKAITLNPLYQNSLIKKNIEKIDAGGST 360
361 YYYSMLLSDYKLYSWGKYNSSCLALKDKKNHNEPTLVDSALFNNEKICDISCGRGRVLAK 420
421 TLANN 425

Alignement of domain consensus (first line) on the sequence (colored line).

Each position reports the amino acid with highest probability; capital letters mean highly conserved residues (i.e. with probability > 50%).

Occurence 149...203 
  1 rVYslGcgen...GqLGlgeeveesLlvPvlvsrssslsekVvsvasGgqHtval  55
149 ELYSWGWGGNlfkGANGLGQGNKNNINIPKRVETFKNEDSEFINISCGEQHSLAL 203
Occurence 206...257 
  1 dGrVYslGcgenGqLGl...geeveeskvPvlvslsekVvsvasGgqHtval  52
206 NGKVYGCGKGEFGRLGKgnhGDQLFFEEIDYFVSNNIEIKDISCGHSFSAAL 257
Occurence 260...316 
  1 dGrVYslGcgenGqLGl...geeveesklvPvlvrsssl.sekVvsvasGgqHtval  57
260 NGDVYVWGRNDYGQLGIensIGDLYSHEVYPNKVKYFEIeNIKIKYIACGDNHMIAC 316