Protein PF11_0469 (PlasmoDB link) - New domain HTH_9 (Pfam link)

Sequence and domain localizations (colored) at: 7...73 

  1 MIKNELDYLKYIICDIFGSCCSDIVEIILLYGNKLSIYELINLSSYEFNVVRNVLLCLLI  60
 61 HNIVDVNIIYSKSIECNHLSPEETRGVINVYDNNKMNQHSNNEMNQNSNNKMNQHCNNKM 120
121 NQHCNNKMNQHCNNKMNQHSDNKNKYLFKVGIKKKNIISHHKHNEELKTIPDIKNEEMQS 180
181 FNFLCNSKNYEYMKRCKCDSCICKIRRVEYFVIIKNIYVLVRYPSILYYIHPTSIIKDKK 240
241 SITSLNNFSTTSSDLQLDINTYNFFNTEMIDEFEDLTNLCDDKNGDIIKNNNNNNNNHNH 300
301 NNHNNNNHINNHNDDYLHNRNQIQDDTFFRNSNGLVEKNETLNFIKKIILIRIIKNGRMT 360
361 INKCIENLNNDDYAEVCKKDVPEVNKNYLRFLFLQLLKKRFIKKCKYFNEHECENDKRQK 420
421 YDVMKNEVRKNDNYKKMYTNNMKHNSNDIDLVQNDPIDDTSLLLYNHTNENNNNNDKNSI 480
481 NLNNIGCNDNVTNPEKSIHYSPYNDIYPNDYAHTTKKIYNKNIINNKKKKKDTRKDEICD 540
541 NTDISKNNLKKRKIDDDIIIKEQENYMPNNIDEQQKKREVIKQLHNEDIHIKTNKSIKNY 600
601 NEYNINGIYKNNHNDNLLKLIDNKYTYFQVDNDTLSIIYLKQECFNFITHFFNLNEVSRC 660
661 IFYVLLNNVKFYYSQEENDYKETCLFLSFEYIEKCVISKLKRNKNIFVDKHVVLQNLNAL 720
721 IKLPDQLIQIKCNQVITYAADFVNIKNIYKKKIISNVLENMTGLEALRIWKYLLTNSEEK 780
781 INDELISENVLIPLNDVRKKLYHLLYHGYIKAHEYNNSNNNKTYIKHSLSFSTDFYFTSN 840
841 KVKENLFTIAKNIYIRKFLENNEINTLHNKSNICINETQDHNKKKKITLTSKEYAVDYLE 900
901 MALINMDKLIFIFSS 915

Alignement of domain consensus (first line) on the sequence (colored line).

Each position reports the amino acid with highest probability; capital letters mean highly conserved residues (i.e. with probability > 50%).

Occurence 7...73 
 1 kLctelleehFGevvakVvstLlrkG.rltlrelvkltkLsldqVkksLvvLiQhncV.. 59
 7 DYLKYIICDIFGSCCSDIVEIILLYGnKLSIYELINLSSYEFNVVRNVLLCLLIHNIVdv 66

61 ..qYlee 67
67 niIYSKS 73