Protein PF13_0053 (PlasmoDB link) - New domain Pep3_Vps18 (Pfam link)

Sequence and domain localizations (colored) at: 533...661 

   1 MNKSEKEFSLKLFKIKNGNINLLKNRITHISINNKCIHLVLCNNTLIKYNVEENELCYID   60
  61 FYNKKTTNNKGEIRSIYFDRNCYHGFICLANKEYIYIHFENNIIKNIIQLKKYNITSVIF  120
 121 NDYTEIKNTFPFLISTTQGEIIEININNKSSKNIDYDVIFSDEKLSILDVNMINIIKCKT  180
 181 SLNSHKQNGHRYDDNNNDDNNDDNNNDDDNNDDNNNDDDNNNNHNNHLNNKHVKDYQEMI  240
 241 KIIYFTTSNSLHEISYTFKNYKNKTDDKNDNTFTYVKLKTTSLPYNIKKQTKVYETPLDS  300
 301 LCSIIKIENIRNTNYLFWLNGCSIFISKINNFKSPKYYTPDNNKKKKNNNNNNNNNNNFF  360
 361 FNNNMNQDENIFSSSSNSFSDSDQDVEHIFSLSDDDYLYEMNNSNILNNTHNNDHTININ  420
 421 NSNPIDNTHIKKQKLPRNKLYTNNNYSHKNKDNVSNTTSIQSRNKYNKINSEFYLDNNYI  480
 481 IINFLDLHIFTTDNITAFSFTKSFYDSVYSTNSNLTYNFKDQENEHNEQNLNINSTNITN  540
 541 STNSTNIKNNSNNNSSNNNNISTMVDMCINQSYIFLLLEEKLIIISNVKFKKVYEQKLDT  600
 601 ETYGQALRIIKDHSDNQVWLCTSKYIFKIIQNKKNNHIMYFNLKKKINSKQIAQSNSYTQ  660
 661 KIKMTNFILKNNKYDIHQYKYTNIRIDEKLISFLHKQQYFNISSFLYNNIHCYNNVIRIA  720
 721 LYIWLIQLYIYSIDLYAYLYKSTSYYFHTKRKNYIFNKNYMIQDTHKKQNLSDLSSDTST  780
 781 GTYVNRDFLDKHNEHNEHNGIRQNYSCSGDCVSGSGNSLTGSGDCASGSGNSLTGSGDCV  840
 841 SGSGNSYSKSCDNYSWSGDFHSESHNSNYESSDKDKVSISEKRGGEHMTNNGNRNTNNID  900
 901 EIKKKLDVTKNDEEGHEISSVLLTNIRGDDKKEEGEILDPHKDKIGNDNKGGNRTTAEDN  960
 961 FMNKKKNKFYFKNKNDNLLKKNKTLFLRFFDQIINKEERKEVKYHFDFGKGKKINLKALS 1020
1021 ECDDFYILLKIYRMKNTEIYNFLKSQKNLIMNDIETYKEIYINNDVDINNYGNDTMMNNN 1080
1081 IYIKMKKKIYKDIYSYKCLEVCIYIIILLKHFKNFFQLNDIIIEIFYNFNKMNFLLFYKF 1140
1141 LCNDYNYIINYYMNNNKYNLLFNIIVLLPQNILLDVLIEHAFALFLHKPHKYVDILIYYD 1200
1201 NIIEDYTHIVMCMFMVIYFFKNKNDHKNIGTSKNVFKRNGNMQYDINEQDNTNEQDNINK 1260
1261 QDNINKQDNINKQDNTNKQDNTNEQDNTNEQNSVNEKDIINSQDNLTSRENIYLYNKPIN 1320
1321 FKYQNKHTEECIRFLEYLTNKLIEENILEKKENNEKENYIYTFQCTWEKHYIINCLLILY 1380
1381 IEEGNNEKIKNSLKKLKSANIHFDYLFIIRFLKEKRKEMFIPHIYILMKYFEEAVDKSLE 1440
1441 LNDYKTAKKAVILCDDEEEKKKLFIKIIKHISKNINDHNLKEIINLVRDSNSILNLHDIL 1500
1501 PYINETIIIEYLKKDICNLLEIYNLKIKAKKEEIKENLHTIDLLNKDIKNIQKKYVILNK 1560
1561 NDICYICRKTIFYKKCYVFSCNHYFHSECALNIYINNKSKEELFDFYTILQQYKNSIITK 1620
1621 NDKEIMICENKIDDILTEECYICGSFSLASISQPFISPNEYELRDTWNISND 1672

Alignement of domain consensus (first line) on the sequence (colored line).

Each position reports the amino acid with highest probability; capital letters mean highly conserved residues (i.e. with probability > 50%).

Occurence 533...661 
  1 IvfGdlsiyvnsnlleeelseeklsdgrdeppkaivLTefHlLLLyanrVkaVnrLNgeq  59
533 INSTNITNSTNSTNIKNNSNNNSSNNNNISTMVDMCINQSYIFLLLEEKLIIISNVKFKK 592

 61 vyeeqfdesdpvgaLglvsDavkntyWlYTqnsiFelvVedEaRdVeyarepsqrdlVll 119
593 VYEQKLDTETYGQALRIIKDHSDNQVWLCTSKYIFKIIQNKKNNHIMYFNLKKKINSKQI 652

121 ksAdflfqd 129
653 AQSNSYTQK 661