Protein PF13_0278 (PlasmoDB link) - New domain RRM_1 (Pfam link)

Sequence and domain localizations (colored) at: 650...724 

   1 MSSNYRNYKNNHDSYCKENDYRNNNNKEKNKIKNNKRDVFERERNQSVIDNNKNMFEKNK   60
  61 YNSRDYMDKKYDNKYNKKYDDKYDKKCDDKYDKNYDERYNKNYDDKYDKNYDERYNKNYD  120
 121 DKYDKNYDERYNKNYDDKYDKKYDKRYDDKYDKKYQDKKDNEYHKGKRKYDERKHSYVSQ  180
 181 EKDYNRRNNSETYDKYKECNIEKNNQHTKIMNHYNNNNSLYNKIEYRKKRSFAKSKEDER  240
 241 NKSEEDLSEDDKNKDYSSASESNFYKYKKRKNNTYEYKDDKDYTSYDNKFRKIRNIDDIL  300
 301 EMKPNILLSRFIFIYKLVDNISEDEIDELIRNISINNAFSLPVNIYINKLSFFSIKDELF  360
 361 VKENLEFLKNNSYFNIIQQKIQSNFLLENRINDDQCCIIEFPSDEASGKLFSLYEKDNCI  420
 421 EIKNNISYIFPLFKLKNKGKNVEEKTGSNKVSDWYCSACNFLNFSRRTACHFCKAPKTSD  480
 481 AKLVDKETSTISTFIKNNINHQENNLYLINNKNLYNNMHVDKGTYNHMLSDPLNMQKVYV  540
 541 YNNMEDNYENILNDTYKDANNNISNNNNNNNNNDNDYNNNNNNNNNSKNNNYNNNYNSNY  600
 601 NRGNENNHLKLSNNNIFFSYNPFHKFNEDSQNYENINKEIICDDQNTNMLILKNMDGNIL  660
 661 IKDFIQFLNVTFDKNDVSCIYLFNDIKGSSKKKGFCFIEFYNINMAKKVMNNMEKNYYLN  720
 721 FQDNYLKLDYVYEKEKQYFFNCIQMAKLDISKSSATVVKNNIPYFNFFVNYFEAVVHMNI  780
 781 HCYTYFLMWSSQIIILKKGKPELSEFFFDYNSQYYYHPLYQLYFDNNTKYYMSLSKGYYI  840
 841 WEDGLKCLLRVYLDNLGENVYERENYDKKFSLMDASKNKEHEETHQQARINDDHKYDNIS  900
 901 NNNIINGHMLEQKLSNYKIEKENEKKNNNENVILNKISSFVEKAKEIALASKKNIEQMNM  960
 961 NDNNLSILEKKNKEIIKKHFTTDSADDEDEENDNDNDNDEHDDDHDNEKEDNDDELNNVS 1020
1021 IKNKDNISDINIIEKQSNDDHNNKQRIDNSSYYDYKKNVKLSDNISNNINNNIPYQNNNN 1080
1081 DMKKGYTNVSNNSFNNSNIYNNNNEHINNNDEKDVISEQSEKNINICFICLRKFLNEEML 1140
1141 QRHIDVSNLHKKNVEILSDPVLSN 1164

Alignement of domain consensus (first line) on the sequence (colored line).

Each position reports the amino acid with highest probability; capital letters mean highly conserved residues (i.e. with probability > 50%).

Occurence 650...724 
  1 lfVgNLppdtteedLkdlFsk.f..GpiesikivrDtretgrskGfaFVeFedeedAekA  59
650 LILKNMDGNILIKDFIQFLNVtFdkNDVSCIYLFNDIKGSSKKKGFCFIEFYNINMAKKV 709

 61 ldalnGkelggrelr  75
710 MNNMEKNYYLNFQDN 724