Protein PF13_0335 (PlasmoDB link) - New domain WD40 (Pfam link)

Sequence and domain localizations (colored) at: 87...148 / 252...287 / 291...329 

  1 MADKEYELRGFLVGHKKGIRCLSTIYSDLFEELKDRNFLFEYIISADYNGTIFVWKRFEN  60
 61 KKGVEDVKKISNEKKDECNELLYDDNFKLYKKIEIHEKIVYSLCYSKYIGIKELQKICDE 120
121 HDEEKYIHIEDHLHIYSGGYDKNIYLFSLNGFIELVLEGHKNSVCSIVEKSKDILISGDW 180
181 NGQVIIWKIEMNKLNENCSFNNVTKNKNDNNNNNNNNNNNNKYDNNYKLNGQFNKGDVIN 240
241 KNNSLDSNKYRYSILKIIDNHKHAVYVTCINDFILTLSQDNILKMWDVEGNKINEIQDIH 300
301 KDSVRDIILFNNNNNVITFSNDENIHIYDMNFVLLKQYKGHNGFIFYVCVNEKDKIMISC 360
361 GDDKTIKFWCIQDIYEYMEIFLKNKSLDDHISFFKNKNNQTYNCLQTINLTDTMWNVKLL 420
421 RNHDIVSACNDSYIRIYTNKKDKQLSRNIIQMIDNKYSKKEDILNEKNQNEYVHDISNIQ 480
481 NVVGKEGDIKVFKNQNKYEAYKYEKNQWILIGDVIDDVNTNKKFYIGDDIFEQGYYDELF 540
541 SIDIGSDHIKILPYNKKDNIHLIAEKFCKRENISISHIKSIVDFINQNCNVNNNNNNNNN 600
601 NNSVHNNQNDNLIKKKKKFNTILNVITIQQAALDKILDKIKEFNSILLQQNNQYKLNNDE 660
661 INSISNIIKIYKTNIKTSYLFNTTDINVTTKIFNWSSDHIFPIIDLFRILVLNKNCDFLY 720
721 NNKYSFNAFKLVYDCISYYINNYDNQNHTNKLDSLLLCSLRFYLNMFYLSTPRYFMFKKY 780
781 NFVLKQINQIQSKNNNIILLLFRIFFNYIITLNENNDKELRKILFEQIHNFSKFISDPDT 840
841 LYTYSLCFHTSSEIYTKQTYEFINKYNVIDFVQNKSNELKNQQNESNEKTFKNISLILED 900
901 LKNIL 905

Alignement of domain consensus (first line) on the sequence (colored line).

Each position reports the amino acid with highest probability; capital letters mean highly conserved residues (i.e. with probability > 50%).

Occurence 87...148 
  1 geck.vl.gHtstVtcvafspd......................sgpllasgSrDgtiki  59
 87 FKLYkKIeIHEKIVYSLCYSKYigikelqkicdehdeekyihieDHLHIYSGGYDKNIYL 146

 61 Wd  62
147 FS 148
Occurence 252...287 
  1 geck.vl.gHtstVcvafspdllasgSrDgtikiWd  36
252 YSILkIIdNHKHAVYVTCINDFILTLSQDNILKMWD 287
Occurence 291...329 
  1 geck.vl.gHtstVtcvafspdgpllasgSrDgtikiWd  39
291 NKINeIQdIHKDSVRDIILFNNNNNVITFSNDENIHIYD 329