Protein PF14_0055 (PlasmoDB link) - New domain WD40 (Pfam link)

Sequence and domain localizations (colored) at: 741...778 / 878...916 

  1 MNQNGEINTKNNEGKNKEQNKDGDKKKVKKLNYDKDELLENDVTKVAGEFDEEKEGNQEM  60
 61 KSFEKMTEKSKKKKDSKKMKNMKKMKKKKKLEKMKNLINSTNNSNNEKDENDFIETFKKK 120
121 NKKNIKKDKKKTKDTDYEDTVVSSEIHDVITGAGDNSNIYINEEIDESDDEYNINTLGNF 180
181 DLKHYEDFDIIGYDIEGKKIYKSDENLIDDFLNSQRDENHWRKIKDVKNNRVVQLTDADL 240
241 QIIKSIRENKVATILNDANYIYENDKEEYKLYPSGIINQKKNEENGSVHERKKISKIMNY 300
301 LRNKEKYPERYKDKKENDEDYIYDLWNNRIYDEFNNINEISLPHILPGHKYSYNPPPELM 360
361 LSSSEKRKLLKNNKDAFIPQNFKNIRNIEYYKKTYFDLYQRCLDIYLCSRTLKNVLHINK 420
421 EDLLPKLPSKKSLKPYPECAFVHYVSNVEEDEKTVDDINKKKMNKNISSYLYPIDINEND 480
481 HCVYTIYHNKLYIFDILTSYNIATIDLLHYFKSVVPLKTKKKSIEEDIHNNIIIKVNKAY 540
541 SILAISYTNVVFILHYESYVPPLKSKCETFVDNIYDTTNSDVKRKKPKNGEGNINKANKS 600
601 KNDALEEESILEGDINDKDGSYHGNNNSDDDGDDNFDDDDENFDDDDDYFDEDDYENFDE 660
661 DDDNFQSDESYDAGTNNNTENTNNDDISKKKKQVHINRNMVYYKTKGLLSVYHSNFKNSE 720
721 DYCYSKDINVKWMLLKSNHKKIKYCVAIKHEGEIKDISWNNNGNYLSVTCMRNIGQYNDC 780
781 YLHHMKTMKSIKLIKKYKHKRGNIISTMFFPRSPYFMVAFENNITIYNLKATNKKERIFK 840
841 KLRGVQHITSMDVHTNESYILVSDSLGNVFIFDLDLSCNPYKKFHLQECPLKKVQFHKSY 900
901 NLFYSLGDNGKINLFYSKFFQDYITNPVLLPIKEISNESKIVDMVWSEKKPWFFTYTQNN 960
961 FSVLYT 966

Alignement of domain consensus (first line) on the sequence (colored line).

Each position reports the amino acid with highest probability; capital letters mean highly conserved residues (i.e. with probability > 50%).

Occurence 741...778 
  1 geck.vl.gHtstVtcvafspdgpllasgSrgtikiWd  38
741 KIKYcVAiKHEGEIKDISWNNNGNYLSVTCMRNIGQYN 778
Occurence 878...916 
  1 geck.vl.gHtstVtcvafspdgpllasgSrDgtikiWd  39
878 CNPYkKFhLQECPLKKVQFHKSYNLFYSLGDNGKINLFY 916