Protein PF14_0254 (PlasmoDB link) - New domain MutS_II (Pfam link)

Sequence and domain localizations (colored) at: 12...154 

  1 MENHEVEEVNEDQILCLYIDTKKYQKSLGVCFYNYLKYEFLMTEFIDNGHFTALESLFIQ  60
 61 KRPHKCFFNSTNDLVDDERLLNLFKICNVQAIPLEKKKYDATNLKDELKLIISHNDDVRN 120
121 YDKHLELENACKCLMVLINYLKLKENQDIHNQCKINIHNMDLYMRLDKAAISALNILPNK 180
181 KNIHSYNNNTSLLKFLDKCNTTIGSKKLVSWLTQPLTNVAEINKRLNIVEFFIKEDDARN 240
241 VIFCNYLKRIPELDKLNHYLKEINQNNEIRVNSKYNEEMILKDIVKMYYSILDFKQIYFT 300
301 LKPIQGKNKETIDEIIINPLRDILNKFSKLLDMIEITIDLEEVQENKVYLISTSFDNELE 360
361 IIANEKNALMKKIKKHKDDVEKDIFADKYDRTYKRANREDIRLVDCNTNVFLFRVTKKDC 420
421 GLVQQDKKKYMTVRMNKNEFLFTTNTLKNLCKQYDHCLNIYNTLQSEIINKTICAVSTYT 480
481 PVIEKFIDLVSTLDVLISFSVVCHNSPFPYVRPVIVDHGENVIMRKSRHPLLELQYNLNN 540
541 FIPNDIHMNKKNSRLIIVTGPNMGGKSTYIRQTAIICILAQIGMFVPCDFCEVPIFTQIM 600
601 CRVGASDFQLKGISTFLSEMIEAAAIVKNADQNSFIIVDELGRGTSTYEGLGISWSIGKY 660
661 ILDNIKCFCLFATHFHEMSNIAYQCEGVINRHVETTIDKEKKKICFLYEIKDGASNKSYG 720
721 VNVAEIAKLPKEVIQKAYEKVEELESAENKYYLKEKLNIDTSASADENYKMKISNYMKIK 780
781 DEIHYLFSSTNENEFMERFVSKKNYLKELAI 811

Alignement of domain consensus (first line) on the sequence (colored line).

Each position reports the amino acid with highest probability; capital letters mean highly conserved residues (i.e. with probability > 50%).

Occurence 12...154 
  1 NylaAlkiskkgdgnryGlaflDlstGefgvsefeDddafeeLlaeLsrlsPkElLlpes  59
 12 DQILCLYIDTKKYQKSLGVCFYNYLKYEFLMTEFIDNGHFTALESLFIQKRPHKCFFNST  71

 61 esevesqkllelrdrvgrrptwefelesaeedlledf.....gvedldgfelplalc.Aa 119
 72 NDLVDDERLLNLFKICNVQAIPLEKKKYDATNLKDELkliisHNDDVRNYDKHLELEnAC 131

121 gaL...lsYlketqkrrnlphlq 143
132 KCLmvlINYLKLKENQDIHNQCK 154