Protein PFA0330w (PlasmoDB link) - New domain MMR_HSR1 (Pfam link)

Sequence and domain localizations (colored) at: 74...178 

   1 MDDKKKHHKKKKVGKKSKKKKINKNGNNKKYHKAFAFSGGIKSAHRRKQHLFELEEKKLR   60
  61 VQKVYKEGNKSSPLIVVIQGAKGVGKSTLLKSLIKYYVGITINNIKGPISIFTKNLKRYT  120
 121 FIEVNDDILHMIDVAKIADICILVIDGSYGIELETLEFLNILYTHGLPKVLGVVTHLDKF  180
 181 KDSKSIRKRKKKLNKRYSEELVEGSKLFFLSGIQNNRYNKTEIRNLCKFLSVIKKPIISW  240
 241 REQHGYILGLKLDVDDLLINNQITSQKNNLQSEHVHNENYVNHASYDNDNDNDEENEKKL  300
 301 TNFLTNCDEKIKISIEGYVYGSKIYKNQKVHIPNIGDVEIDNIQILQEPFKLDEQKKNPN  360
 361 IYAPMSDVGNLTFDFDNMYIHIPKNKVNFTREEFLLADQREETIPGDHSGEKNGNTLKDD  420
 421 EGGGDGDDDDDDVGDDNVDDGDDDDDDVGDDNVDDDDGNDDDDDDNDDDDNDDDDNDDDD  480
 481 NDDDDDDDNENSDKSSHHNKQSNDNEKYITDSIKMIRELQKSNGVFSKQQKDNLILFNET  540
 541 NDNNGASNIRRKAPSNVYISEKQKKKKQQDSYVNEKAEEYNKLESILYEKKNNDEEYYCA  600
 601 NNVTISSDDDKEENDASFREFYRKYGLNADMSDDGGNNDINIYNGQESEEKLKDTYDKLI  660
 661 DGGHDEDDYDDDENVGDENDDDEENDDDENDDDEENDDDENDDDEENDDDDDENDDDDEN  720
 721 DDDDENDDDDENVGDDDENDDDDENVGDENIDDDDDDDYNNYNNKELKHKNTLDPNKSTV  780
 781 NRMEAHDIADILSFDNKISLDTFIYDFSYINRKNNLLYFRGDVINVIKREERKLDESCHL  840
 841 QEYEEHFYFIKNMLSTDIVEDKKRGCYSFMNEDNYYYDKLDTFRSDEEDIFIFNNLSISL  900
 901 YDIVDSNIVDNFFSRYDKVYRMFFKNRKRGNMGINSEGDDNNNNNSDDDNNINSDDNNSN  960
 961 SDDNNSNSDDNNSNSDDNNSNSDDNNINSDDNNINSGDDNNLKDKDKGNIGNEINIKENL 1020
1021 KKLKEEKLIEKEKFRETEKIGVLNSGYGSSVNIGEYVRIELNIEKKKLAILKNNLIICGG 1080
1081 IQTYEEKDSLIHCRIKKHRWFPKLLRSNDPLIFSVGWRRYQSIPIYSISERNNVRLRYLK 1140
1141 YTTEHMHCNCTFYGPLASVNSGILALYNYKKVPFYRICINGLIIETNNNLNIMKKLKLIG 1200
1201 EPYKIFKNTAFVKNMFNSDLEVCKFLNCPVVTPSGIKGLIKNKINNNGDFRCTFADKIRM 1260
1261 SDIVILKLYVNVKIKKFYYFDIENKIKSINELRYLYNIYVNHNNNYRSIPFRHFYHTKIQ 1320
1321 IKSKLLKDLPFKSKPKLFKKLQNHANLNNKQLTNNINNKKTKTDQINFNALPNPKLAAKW 1380
1381 YQMLHTIKKNILDQKKAKSQLSYHKKLKEKLKIQQAKTQVVKQRKKISYKKGRK 1434

Alignement of domain consensus (first line) on the sequence (colored line).

Each position reports the amino acid with highest probability; capital letters mean highly conserved residues (i.e. with probability > 50%).

Occurence 74...178 
  1 lrvaivGrPNVGKSTLiNaLtgdyPGtTrdpnegrvel.............dgrqiilvD  59
 74 LIVVIQGAKGVGKSTLLKSLIKYYVGITINNIKGPISIftknlkrytfievNDDILHMID 133

 61 TPeeaDlilfVvDaseglteeDleiadllrlekkgkvilvlNKiD 105
134 VAKIADICILVIDGSYGIELETLEFLNILYTHGLPKVLGVVTHLD 178