Protein PFC0260w (PlasmoDB link) - New domain Rad50_zn_hook (Pfam link)

Sequence and domain localizations (colored) at: 109...156 

   1 MMKIFINNVNTYSGSCFCKTFDEIKNEKTTIYGTVDDHNLSKEDCIFYNYDNVKKIISKI   60
  61 PKDNIVKYILKCKLVIYDLHNTDLEEIEYVIRKLKYEKIKHNMTIILISSIMTWSKTKRK  120
 121 FIKKIVEENKEITKNQSNNITHKSGETNNNLEKKENQNIETKNEKTSKKKDKKKNENYNK  180
 181 NNKIVDHGVHNKQANIIKNEDAKSNIQEIHIEEIKKKEKILYIPQIFNEKDYLKRISSTH  240
 241 FDEYKSVETLMLSLNSMKNIKTHVVVSGLLYGNGENVFFSIFKNAWLSKDNHIIDKGDNY  300
 301 IPVIHIRGLCEYIKQLYISESKKKYLIAVDNQYITQKEIIHTIASHISGNMNFMHVSPHE  360
 361 SIFYEHSEKLCVNLRFQCTNIYDDNQVDEQEKKKKLNKKNKNKNKNDEGDISDHHKEDNH  420
 421 SETDNNDSEKKESNTEDDNIDSEQNSSINMNNSNDDSQNSSNSESNNNDDNDSNNSNEKK  480
 481 KGKKENNNLKEKKNKSKNKNKKKNLITFHCQDGFINNISIIAKEFCEFRNLKNLKVLIIG  540
 541 QPGVGKTFIAKKICDHYNLIMCSINMLIDEYKKKTDYTFPKYYQEYINELDNEKKKNVPP  600
 601 KKLTLSDLCSLFYSKLENNECKFRGFVLDFFPRNYEEAKYFFDNYKMDVPEKEKEMKNGK  660
 661 RDEDDTNRKGNNKSKKKIKKKKNERNDKEEDDNDKDEDDNDKDEDDNDKEEDENDKDEDD  720
 721 NDKEEDENDKDEDNEDNENDKDEDDKDEDDKDEDDKDEDDKDEDDKDEDDKDEDDKDEDD  780
 781 EDDNDKDEDDNDKEEDDNDNDNDIEENDNTEDSDYREDNDDEKISGNSENTNMMTHSDEE  840
 841 SQSVKQMSNKKKKKKKKKKILENINKYIIMPEFVIILKSTEELCKKRMMNLPENEIIKGH  900
 901 NDEMGFERRHKKYINENCRNDYFEFDQKQSIEDYFIEHDIEVYTLNINENTLLEHILTNI  960
 961 YIFIEKNVKFNNFLPSTDEMLKNKLQEEQQILMDEKQKIKDIEDKVVLEEIKQNDDLIKA 1020
1021 EKKRQQLLIKHQQQYIHNQSVPLRFYLIKNILPILTDALIYICKTKPKNPCLHIAQYLLE 1080
1081 NAHKYNIEEPNLENLQPEKEDEDNQLGEKPKDEK 1114

Alignement of domain consensus (first line) on the sequence (colored line).

Each position reports the amino acid with highest probability; capital letters mean highly conserved residues (i.e. with probability > 50%).

Occurence 109...156 
  1 galesekaelkkaieeleeeeseLteeekkelikeykseldrlpeelk  48
109 SSIMTWSKTKRKFIKKIVEENKEITKNQSNNITHKSGETNNNLEKKEN 156