Protein PFC0470w (PlasmoDB link) - New domain tRNA-synt_1 (Pfam link)

Sequence and domain localizations (colored) at: 240...622 

   1 MTILLTLFIIYVCLIGHLTKVYIKENISNQKKNPLNFIRRKHNNTKKNRKLSFNINKNIN   60
  61 HCKRIVKVEPFFIHKNVRRYVYRRSCFIFNIWNSSKVIKDIYKYIDSCTSFLRKFKSLPS  120
 121 IINVENKKYGKLEKRKKEKNDLCPNIFITYSSNNVPRNISNKLEHFIYKQKDIPKEQNIL  180
 181 TYDFFKRDEELLNDQNRNDFIKKYYNPSYHCDEHPFEHIYNIKDMEHIYDKSIINYIYDL  240
 241 KRKEEIEYIRKFNRSHYLNSYLLIYPPPNLSGNLHAGHFFNFIHQHIFFLYNKYIMGKYA  300
 301 IPFFGFDHGGLSAHEMFAKHMRGEELGREKYINEIKKWQENLKENMLKDLQNMNITYNEK  360
 361 MLFNTMDKGMIDLINKAFYILYKNNMIINRLYPVYYCKELKTAIPKMDIQFKNAENKDIY  420
 421 NLKCYLVKNKNKIDNIYDDKKCIATKNENDHNMNNNDITYCSNNPPKNVTNKNDDTYEKI  480
 481 NFFEKNNMSSNCICGDFTITNNDDKYEEKKKKIKNMIEEYDCKEIKFFEKKKFPYYYLNE  540
 541 EELKNKALINVSKYIYINIENIEDINNIVAILYYSSNKKKYENMYALLPHSNVIIPLIFH  600
 601 KKKNFPSLISGNKKGEEREEIKDSKEIKEREEIKEREEIKDSKESKERDDNNNNIDDDDD  660
 661 DIFLPVYSLEKKHDYSFNINKEKGTSQLFFNVSHGKKEHMTYNINNDEKEKENNLINIIN  720
 721 CRKKDKELKFAYYKNYKCTLILSEHLCIKYDELCNMYYNNSGNKNFNILPCNRKNYFLEN  780
 781 YETHPKDWILNRQIWYGHTIPLFKYEHFVTKEESKEGYEDIEKKNKIINKNNNNDKNNNN  840
 841 NNDKNNNNNDKNNNNNDNNKNIIIADHFNCFVYGKNVDEAYENLIKSNLFKKECIKKEYL  900
 901 KNDDILDSWFSSCLYFLHCLNSNNIDIYDLLKKKKSLVDFTCTGQDILYPWILRSFILLN  960
 961 YFIENDYLNELLPSKDNYDIVHILQGLKKEKDNKYLSTSILSKTVKFHGILKDDVGKKIS 1020
1021 KSDENSTYYKKYLEDINMDTLRLSFTFLQKNVEDIVWSKNNIYKSEKFIKKFWNVGQFIK 1080
1081 QNCNYESYIRMSKVILANTNNINIENIDDDSIDGDCIDDNIKVLEFLKTKTQHISCISIF 1140
1141 EAYYYTIHLILQYMKLYNLNKSIILINDFIMNYFSKFFLNYYSSGKSQISNFLIYYIFKG 1200
1201 LIKFLYPFIPHICEILYIQIFFKEKEKKQILNASSPPMLLYENYKFFPNQKFSLEPKIQS 1260
1261 VVSDHFLTFMEIYNFLRKFKKENKETICNNNTLYLYIKQKKGAELTLLYFKNEEHMLKRA 1320
1321 FHMNIIFNACEKNKLGYSFLNEKEHIQRLNTRKVIYDCDRFVVLAQV 1367

Alignement of domain consensus (first line) on the sequence (colored line).

Each position reports the amino acid with highest probability; capital letters mean highly conserved residues (i.e. with probability > 50%).

Occurence 240...622 
  1 yefWdeqgyFkksnrKgskpsFvlhDGPPnATGllHiGHALnktLKDiviRy.krmqGfd  59
240 LKRKEEIEYIRKFNRSHYLNSYLLIYPPPNLSGNLHAGHFFNFIHQHIFFLYnKYIMGKY 299

 61 vlwvpGwDhHGLPiElkVEkKLkekklGrekFrekCrewkaeyadeirsqfkrLGvsvre 119
300 AIPFFGFDHGGLSAHEMFAKHMRGEELGREKYINEIKKWQENLKENMLKDLQNMNITYNE 359

121 Yf...TLdpeleaavwrvFveLhdkGLiYRGkKvVnWspklnTALSeaEVqQeYKDvkdp 179
360 KMlfnTMDKGMIDLINKAFYILYKNNMIINRLYPVYYCKELKTAIPKMDIQFKNAENKDI 419

181 FplkgslvinPekvkkkkeskyiledfrkyihPFldReipIskddefinpvdddGtynee 239
420 YNLKCYLVKNKNKIDNIYDDKKCIATKNENDHNMNNNDITYCSNNPPKNVTNKNDDTYEK 479

241 apeFqGlkrAdkkIvelLkEkGl...LlkiekrmkealkavedGkvqfvPksPIPawysk 299
480 INFFEKNNMSSNCICGDFTITNNddkYEEKKKKIKNMIEEYDCKEIKFFEKKKFPYYYLN 539

301 dgEvyvvagreeeegeeawkdlLeqdeDVfsvlgwPfttkefkDmlaltGsaNvIdPldv 359
540 EEELKNKALINVSKYIYINIENIEDINNIVAILYYSSNKKKYENMYALLPHSNVIIPLIF 599

361 idkksFPnLiassdygrD.infS 383
600 HKKKNFPSLISGNKKGEErEEIK 622