Protein PFC0475c (PlasmoDB link) - New domain ubiquitin (Pfam link)

Sequence and domain localizations (colored) at: 35...107 

  1 MGSSSLPMSQQMYFSTHNALRINEENDVINTLFYEINGSRHISLLIFPFYDVQMLKRLLI  60
 61 KKLNLPGGVKVNDIIIFYKGIKLPNYRIISTYIDNNNNRNDKKKKKKKINKLYWAIKDTN 120
121 PNASIRVIDSTKNYPEFFEDILNEIKLSFKKNIAPKLTMDGTGGTYLLYNAKKKICSVFK 180
181 PLDEEAFAPFNPRGYEGKMYQEGFRAGVLSGEGASREIAAYLLDNCYNNFSNVPCTIMVE 240
241 ACNPHFNNKSKLKYVDKETNLKWKCGSLQEFIDSRESVGNYDYKQFSIRDIHKIAILDIR 300
301 VMNLDRNDGNILVSPLKTLKDSCNQFVYRNNKFTSSNNEDMLKRIITIDKKPSRYTLIPI 360
361 DHGLILPHIMDVAEIDLVWFEWPQIKIPLDDEELEVVFSFDPDKDAEKVRNKLLIREDCI 420
421 RTMRVCTRLLQIGAKMHLTLYEIAKISTRKNIDEESILEHLVKDSITQAYQMMDYTSLMS 480
481 TNRLGYILDLAEIKMNKKKKNSKIKTVEINDDKIINQLYEKNQGNLFFNEKGETTGGEGS 540
541 LKSPPSIKKDNDIIKSNIYNKNVSNNNLIKDVDDMISINSSSNTTNSIKNVSLINESYKN 600
601 IYSNNVIKNNNSDFFNKNIENNIDLMNITNQVNNINLCLNIKKEDNETNGEENDMSLKQN 660
661 NLKHTHLNSRSDFSKECENTTESKNITMKLKKENFSNNSPDNLLDKPLDTLLNEPLDHFL 720
721 GKPLNKFVDKPLDNMLENISGEVSDMSNISNNLSNVSDKIKVDTSEYKDEALFCNSPNDD 780
781 TKVKKKKKKKDSDLDGYPKDQKNYTNCDDGDKINSDDNGINKENEMINQVKNNLNDDEEE 840
841 EEEEEEEEEEENDDYDVTFKKPSGTIKRISENTGTAYRSMEMNKINSIWMIRDKNNKIIN 900
901 VKWENKIFEKLFFETFENYIKKYINDYHRDWRNYPYNGSKITTTKHAYLNNIK 953

Alignement of domain consensus (first line) on the sequence (colored line).

Each position reports the amino acid with highest probability; capital letters mean highly conserved residues (i.e. with probability > 50%).

Occurence 35...107 
  1 KtldgktitlevdpsdTVlelKekIeekeg....ipvdqQrLiysGkvLeDdrtLseYni  59
 35 EINGSRHISLLIFPFYDVQMLKRLLIKKLNlpggVKVNDIIIFYKGIKLPNYRIISTYID  94

 61 qdgstlhlvlrlr  73
 95 NNNNRNDKKKKKK 107