Protein PFC0565w (PlasmoDB link) - New domain MMR_HSR1 (Pfam link)

Sequence and domain localizations (colored) at: 15...155 / 634...763 

  1 MKNVLKKEFVRSFCYKICIAGACNSGKSSFNNDLLDRLNVSHKKSVISNVDNYCINNNEN  60
 61 IFKLHKKKCSVTDTIGLNERMISKLEKWKLEGYNMDMENNNILKNYYNLIMDSNLIFLCI 120
121 KHTEIRQCDILSYNIIKDMYKNLDNIYTIVYNNIKDGTNTQHTHIQSYNFLDIYEDFTNI 180
181 IFYPYDINEDLTNVIKEKIINFYEIKKVTSQQNDDQFKDHHELKNDISQDNDNILKNCHI 240
241 NKNLLNTLNKKEEEKEEELLFNNNQMYDIIDESVRIFHPSMSSETRNYFYKFVNLKKKDK 300
301 SNMKLFNDYFSERILNRTPRKIGQVEFDEKKNKIINNENNENVKNNENVKNNGNSDNNGN 360
361 SDNNGNSDNNGNSDNSDNNGNSDNNDNSDNNDNNVITMNNVKNTEETGKDNKTKENVMNT 420
421 NLYPMDTQTVDNTMYQYNDNYDKFIKKKQTSIYETPKNKEEDDNDDTNKFREYFFRKIQN 480
481 NYNFEERKKDIQALKNKRIRILKNILNKKEHANPYDLININKKKYDDKDIQENHTNDVPL 540
541 FYCTTNDIINEGNKHIDIVNKKDVKDKDLEQINHRKVDENMHRDINIEMDSTALHNCVDD 600
601 DDNNNNNNNNKININSYRNKIMMNDENMCNNKDIKVCVLGEKNCGKTSLIESILKNNIIN 660
661 ENDIYELFGKRKYINNDMSFYYKNKKIEILDTCRLSKQHKFKNEDLLFDENNRVYTNIRK 720
721 SDICIYIKEIKNNNINLNKVDKKMIFYLLKEKKNIIFIVNKIDLILTNFEKKRNDFLQEF 780
781 SNLFNDIPIIFLNTKNNTHINTLLNKIIHIHKMNNVIISTSLLNLFLMQFLKLFPIPWLK 840
841 KKKCHFKYIKQINTNPITFLIFTNLYRKVPNNYLTFFKKKLKHEFDLRYINIQFIFKTTC 900
901 DNKEKVKGRIK 911

Alignement of domain consensus (first line) on the sequence (colored line).

Each position reports the amino acid with highest probability; capital letters mean highly conserved residues (i.e. with probability > 50%).

Occurence 15...155 
  1 lrvaivGrPNVGKSTLiNaLtgk.....kraiVsdyPGtTrdpnegrveldgrqiilvDT  59
 15 YKICIAGACNSGKSSFNNDLLDRlnvshKKSVISNVDNYCINNNENIFKLHKKKCSVTDT  74

 61 PGiiegasegeg..............elgertleaieeaDlilfVvDaselt.edy.tie 119
 75 IGLNERMISKLEkwklegynmdmennNILKNYYNLIMDSNLIFLCIKHTEIRqCDIlSYN 134

121 eDleialekkgkvilvlNKiD 141
135 IIKDMYKNLDNIYTIVYNNIK 155
Occurence 634...763 
  1 lrvaivGrPNVGKSTLiNaLtgkkraiVsdyPpnegrvel.........dgrqiilvDTP  59
634 IKVCVLGEKNCGKTSLIESILKNNIINENDIYELFGKRKYinndmsfyyKNKKIEILDTC 693

 61 Giiegasegeg....elgertleaieeaDlilfVvDase...glteeDleiadllrlekk 119
694 RLSKQHKFKNEdllfDENNRVYTNIRKSDICIYIKEIKNnniNLNKVDKKMIFYLLKEKK 753

121 gvilvlNKiD 130
754 NIIFIVNKID 763