Protein PFD0160w (PlasmoDB link) - New domain B-block_TFIIIC (Pfam link)

Sequence and domain localizations (colored) at: 30...761 

   1 MDKILMKYIFDALCTTFSKKDVKEDRKLENTDHVPYYITLEELYECLHNYKHMHMDIHMK   60
  61 KIILENLYFCKDIRLFKKEYNNCVSSDEYNNDKNVKIYDDNDKKDIINNSCDYYVCINNI  120
 121 YIYNKHNLFYYQRIKESKEKIFLLLYIISGKYNGLIQSSLSKYVKLDPRIIYYHLQELFQ  180
 181 YLLVKKISININNVDCNMKDNKVNTSIVMNELEKKDYKYNMINHIHSNDVHSNNVHSNDV  240
 241 HSNNVHLNNVHSNNIHSNNIHSNNIHSNNNNNCVYRQNDQHHMNRTSNSFIKLNPSYILY  300
 301 YNIFFIYNLLPIFIKNLLYSQNVMSINKIILFLLNKFIIIPQKILSLIFFKLLIVYNPYY  360
 361 FIQVRKALRIFNCILNSLINNKKVIMCKIKIHSTYENCYLSYENKNKMNYHNIINFLLMF  420
 421 YYNYDYIIQFINKSCFLMCEDYSTGFLFRSANMNTFRLANNLGTLKGYDQNGIIQSVCKK  480
 481 EAGAALSSGSDHVKEDIDILKGKSDQDEENSKNDDIYINDNNNNNNDNNNNRGDENILLN  540
 541 KENCNVKIKEFKNFMDININPNNSNSDCYSSSLNENDDSIESDVSFIDVDNNVNAYVDSS  600
 601 HLKGIEKKTKKKKKKKKKGTSCCSSSSVDYSHSEKYNKNDDENNNSDDDNDDNNNNNNNN  660
 661 NNNNNNNNNNNDDDDDDYYYYYNDCAHLHTNKYISLNNICMFDKMKYLIISKGINGITTK  720
 721 EVADSLFLTVKKTNICLNRLVKNKVIIKVPERKNKNFMYRFFDIKIYEYIQKTKHLLPLT  780
 781 GENMEFPSNKKKDKIETIHSDTLNNNDNNLGGKENQNVVQSKEDDTYINRSNNNKECMLI  840
 841 NSENNLSNNNKEYILINNKNNLSNNNKEYILINSKNNLSNNNKEYMLINSENHLSNNNKE  900
 901 YILINSKNNLSNNNKEYMLINSENHLSNNNKEYILINSKNNLSNNNKEYILINSKNNLSN  960
 961 NNNFYKNEIHSIQNNQENQNNFNTIHFKKLNESLNVLSFIHTVNKIDINILNYVIPKEIH 1020
1021 LSDSYDNYYDFFQSYVNHFKNFEDKYDLYTCSFHLFYYLKFLLKKNEKEKIIKKKKNNEN 1080
1081 DMGAINNKKYAIQKKNYKSNDGDNNNITFDVEHVEHSDDNITFIKYFMEDTKKLKSNLFI 1140
1141 KRLFLFCHFLICSKIVTFRFIQDLFLKIENNGRMIDRKSVQRLYDYSLKINESFKKYKIP 1200
1201 STKVVKYIFYDSYVLNEHEANKFYMKYHQEYIQYIYKYYTYNKTNKDPMEYYDMSSIQKD 1260
1261 NVKKEETNIEKFDKKFDKKFDKNVINDKYVQEQIGTNQNISYTNNKYDHNKYKEYKTIDN 1320
1321 STNNHIYNNNNIYNIYNINNCVTSIFNVDNKMHEYNMNNTGNMSIPNNKRKNMDIMNEPL 1380
1381 NYKKNKVLQKGDDNDMEKEIISPGHINNNHNNNNIYNNNNNIYNNNNNIYNNNNNIYNNN 1440
1441 NNIYNNHRSSGFSNNNEQCNNVLYIDILNESAFNLKEQNINNNKYTKDNKNIFQNFKTTQ 1500
1501 ELSYSINYFNGFLFSKMARYKYFHKCLIRLLKEKMKKKKIIQNYKIKNVQINQIYNKNKK 1560
1561 YMNYISYNIALTIKYIVKNMFLDDYLKIINIGCQLNYIENYLLNNNNNNNKKKKLKLKHL 1620
1621 PKELFEFLTSYSLFSCDKKDMINNFLITRKNNYYNINQLKINDNVFSNTKKINELSDYDM 1680
1681 NIIKNNEQICIFVYIYSKLKFLHNMNLIHIKHKKKKVSSHQFKSDVTFHNKNDDLNISFM 1740
1741 DLKKNNLNIYIKKKVTINIFAPIKIKYAYYNMMTYNNFEQYYYDLYLSVEKFKKFLNEVC 1800
1801 SKYSPGGKPKIQDIIRVWKFKNKSFKFLILHNTYTKQLYLTRKFRQLFMNLVKKKKLKKE 1860
1861 ISKVKLIKIIRSCKEYNTFRDSYNLSKINLRKYVSIFHNLYNNTQQQKQYQEVDENHKGE 1920
1921 GLQKNAFISSTLINRDISLLCPFCNDIFFLKNDLLNHIANIHNINKNFSDIINFFSKSNQ 1980
1981 LIHKKLSHFLKYKNRFNNESNHVLQYDINQEYKKKIYEKQQEQVEKGNILLSLTNQHDNE 2040
2041 NHTITNKQHMLSKNEMICKQSNVYIYNNDNGINKNNKKKKNKHLYMYNLIKNDKNKFPQN 2100
2101 VNNMNYNKPFLNKYLNYFLERIKIKYTLRIVYIYFVTIMVQLIMSQKKLNRQKKKKNANN 2160
2161 NNKINNINNINFINDANDVTDKQKKFKKKNEQIKPTSLDVLKNGTHGKETNKKKIKKKIK 2220
2221 KKIKKIKKKIKKKIINLNIHNDNNDNNDNNYHNRHNKVLKKNKIKLKKKRYNKSHEKNIL 2280
2281 LHKTHQPYNKMNNSILLKKKVKNNKNSFIEYKLNNFELMHFLKNKTNSIPYKKSIWNAVN 2340
2341 HMLIGKFKYNICMFIQKNLFHYFKTNLVHYFFLLSNEHLSRCIINYFCTNIYSCTYSNIN 2400
2401 YYYSKYIKNIFHFKFITLVNLIKLLIINYGEVFTLYKEISNSLFYYKIKDVLNVIKFIQK 2460
2461 RNYIVDTSYVLSNYITTELVHDNIFSNFLYKSLFYKKKLSLYVKKSYFDNIIDIMYLYGV 2520
2521 SQAHDLFKRNHHNDDHNDHHNDHNKEDNMDNSYYHNNYDYHYVYHYDDDKNEYKKDKSKN 2580
2581 ICYHINDLIKCINNSYIEQEQDEENNKDTYHISMDDYYDNYFNDNSLLNEHVNNSEDDYT 2640
2641 HSNMVYDEKNENTQNGDISANQHEQRNNDERAYSRLDNDEEFFNNSNDKSSSYDSSSIQD 2700
2701 SDIFDQLSDDYEIIKLLEHDNNEKNKKFQGGISQHINYLTKHVSEYFPNYYIVNHFKKRK 2760
2761 LAKKLSHIFPSNDIINHNKQYGTSHNNNNNKKNNNMFNFTYYCDGTYFNNPLFKYFKKYC 2820
2821 LYIYENKNCENREIYKDSQKCKRLNNSIILSFNMNNNNTETCNRKNNNFVNFTNLFKKYI 2880
2881 ESINIKDINNIYNKNEILLYNISKKTFIDFDTYPQNIHLYNIAYISNIHKSLTHLLNIQI 2940
2941 INMKNNIFWLQQKKKKKIKKINNNKRTSKNKLIFVKNKNKGRTKNNCILVEKHNNILNKN 3000
3001 NTSSYPSSYDKKKKKYIKNIENKNVIINNKNCNNKNKFVRKVRVKEKKYTNNQHLYKDSF 3060
3061 IFVIHILYKVFYLNNILDDYDEQGNYKTVPRKEKTKQNIQMENNKHNKYNKNNKSLSQRI 3120
3121 NEMYNNQNNINVINTLYKDHEIEQNNNSSYNNNNNNNNNNNNNDEESTHANNNNYNIINS 3180
3181 QKCDDNILHVNENSDSVVYNYTVNKMIFIYLSVKKKKGNGIFIDSLKKMYFKKFIVFNTC 3240
3241 YHKNNYVSIKKEYDFILFFLSKLNVIKILSFMNTHKIFLAKYHNYNSYKRKNIFYQHNYK 3300
3301 YPFLNMISVYLKNGKFNFEEYTDKTTNKFKRFITKNKMINYLNIIPRDIPNNIHNNIHNN 3360
3361 IHNDIHNDIHNNINNDIYNNIHNDIYNNHLESLILPDRHNKKYVQQKINYHTNNMNYADY 3420
3421 LFINFINNNTLYKPKFIPNLILLFNIQCYIIIHDFVFNYFLQSGNRICEQSKEKETHTHT 3480
3481 QTYTYTHTHTYTQTCDDISSVQHTLFESPLGNKLLYMMQYKTYPQVIKYIKKIINRACKY 3540
3541 LEFSICSYYKNYEQSIHRTKNINKQIKKKNIFIYYFKDNYVNANMFNYINGSINVKFIFF 3600
3601 YILKIFFYLKNNPYSTIFDIYKSVELVNFCDLNFLLKSMCQDKFIKFTLMYVSKNSQMYK 3660
3661 LKKNYKIINIFNNIISNKKIKGNGKKEESYNFFDTTSFEDETDNYSTDQCTICECTQKDS 3720
3721 YLININNNDKNKEDGLILNNKSTYNQKEKTNYKYKKFIKKIMYKKVKLYYVQDENVIFNK 3780
3781 FEGTLWN 3787

Alignement of domain consensus (first line) on the sequence (colored line).

Each position reports the amino acid with highest probability; capital letters mean highly conserved residues (i.e. with probability > 50%).

Occurence 30...761 
  1 lleEIAleitlpeLWeflatrlplplddrfkefvWqwLlrhPeieyelpaerplvggnkr  59
 30 NTDHVPYYITLEELYECLHNYKHMHMDIHMKKIILENLYFCKDIRLFKKEYNNCVSSDEY  89

 61 tnhlsledglllpsddpe.eeiypwgdrlrivaSqdlrwlaLghekesklpallLeeIAr 119
 90 NNDKNVKIYDDNDKKDIInNSCDYYVCINNIYIYNKHNLFYYQRIKESKEKIFLLLYIIS 149

121 sRenGitqsDLaketgqDpRsvfyrtkkLqkkGLItkqaiiikgkk.........tqirt 179
150 GKYNGLIQSSLSKYVKLDPRIIYYHLQELFQYLLVKKISININNVDcnmkdnkvnTSIVM 209

181 sllvLkrFakdyidd............................................. 239
210 NELEKKDYKYNMINHihsndvhsnnvhsndvhsnnvhlnnvhsnnihsnnihsnnihsnn 269

241 ............................................................ 299
270 nnncvyrqndqhhmnrtsnsfiklnpsyilyyniffiynllpifiknllysqnvmsinki 329

301 ............................................................ 359
330 ilfllnkfiiipqkilsliffkllivynpyyfiqvrkalrifncilnslinnkkvimcki 389

361 ............................................................ 419
390 kihstyencylsyenknkmnyhniinfllmfyynydyiiqfinkscflmcedystgflfr 449

421 ............................................................ 479
450 sanmntfrlannlgtlkgydqngiiqsvckkeagaalssgsdhvkedidilkgksdqdee 509

481 ....................rlpldediLkespnkirsvsDLKr..eLgldkdrwlskaf 539
510 nsknddiyindnnnnnndnnNNRGDENILLNKENCNVKIKEFKNfmDININPNNSNSDCY 569

541 rralrklee.ll.....igvlkrviaksplnp.aksckyskgtklikeptdskldpteed 599
570 SSSLNENDDsIEsdvsfIDVDNNVNAYVDSSHlKGIEKKTKKKKKKKKKGTSCCSSSSVD 629

601 ldsfdeddkdedddeeeeed.eaie.ldtgnatdllqkaglvsqe.gee.veeggrdips 659
630 YSHSEKYNKNDDENNNSDDDnDDNNnNNNNNNNNNNNNNNNNDDDdDDYyYYYNDCAHLH 689

661 wnrerPLen.Qvye....lidkaGtkGisaleickrlklyrRpleklLerlveswaivrd 719
690 TNKYISLNNiCMFDkmkyLIISKGINGITTKEVADSLFLTVKKTNICLNRLVKNKVIIKV 749

721 tedeGrirfyRy 732
750 PERKNKNFMYRF 761