Protein PFD0590c (PlasmoDB link) - New domain zf-DNA_Pol (Pfam link)

Sequence and domain localizations (colored) at: 1582...1756 

   1 MSSVFDKLKKQRSKECKATDFYEVKNKNDEIYEVVDEEGYMKNKRSLQNFIVGGDKDFDS   60
  61 SDDVIVENINFTLLKKKNVDKEPKVKRNQTLDDFIREKKLRKTLSGNKLSKEEIHKTKNI  120
 121 EELMDQNTSSDSDGESRTRKRKTRESYENSMYKNMNKSSCYIRSKDYEYNIYDMKHTNEY  180
 181 NKKIIENNNNNNNNYYYYNNYNDMSFSNKDLEYSKYTKVKNEKEDIDKHQPYDIHRDMGS  240
 241 SLKKKENYVKQEEQSNMINVGNDDDINEKKNKIHLMKNELVLKKEIQIKENEENIKEVKE  300
 301 QGSKNNNNKNNNDNNNNNNNVDDFYNDYILNEMNISPLFIKIENETLKKEEKKLKENDIN  360
 361 DKEEDILENDIDSEMLKNKYEQLIKYEENNNLFVNVYVFDICKHRNSIILFGKTLTKFKK  420
 421 YKSISIFIENLDRYYYFLLNKNKVYYENGEEIKFNHEKFKIHIMSEFLEEFKIIREYHNI  480
 481 KMAKYKIVKRKNLNLSSYDDELYIKVLYSYNNDPIHEKFQKGSSYLSFYCCNEDIVENFI  540
 541 IKKNFKLPCWIKIKNLRKNDLSNLTYCYFDCIVEDKKSILLCDKVHEKKVDTSKNIDEQT  600
 601 SPKINNVNSNNNNNNNNNNNNNNNNNNNNNNNNSSNNFGRVIISDDGPKKIEQTYQQLSD  660
 661 INLNKLYIKVVSLLNEENVHEIFSICSLVQIDKLKYINFCGISRKCSKKGTMYNYNKTLC  720
 721 KLFDNEKELLHTFLEKIKDLDIDIYIGYNILNFDLEFLIHRCNVHNLNSYILSRKKKMKK  780
 781 NEKMKVNKFNGTNSTGSMYNIIQNIKGRLIVDIYLLCKDSIKLTTYCLDEIIDHVKNKFQ  840
 841 DKSKQVTNKTNKSTNLNKTNYTNQQSVVSQQSVVSQQSVVSQQSVVSQQSVVSQQSVVSQ  900
 901 QSVTSQSTQSSQANQPNHTNQSTHMNHVKTEEHIHASNKATGNHDIPTDVASTNSHKSSN  960
 961 THINIFKDFLVNNINLINCSNIHLYDAQSIIANNLNTYVNSQIFCINETVNVCNILQIIE 1020
1021 KTRDLTKLSGYIWMRSLLCYTSERVEFFLLHEYNKKKFITPLIKKRTKKIETNQMKNKNT 1080
1081 AKYLGGLVLDPLCGYYDTFVLYLDFNSLYPSIIIEYNVCFSTLKLKNCDVSIEDNKLNTK 1140
1141 KNGNINNDYEKNIHSDAEKNIHSDDDKNIHSDDEKNYDNDKSYNKLEDDNLLENNVEIDE 1200
1201 FDRSKPGILPCILKSLVEKRSVIKKLISNEKNKEKKELLLIQSLSIKLISNSIYGCLGNT 1260
1261 NNRFYAKHIASYITSKGRNLLQHTKFKVEKEFNLKVIYGDTDSIMIDTGIKANNINNYKE 1320
1321 SFKLAHLIKNSINKNYKKLELDLECIFSKLLLLKKKKYACAKVIDNNLEKYEYEMKGINF 1380
1381 IKRDFSKISKLIGNEVLRIIFTNRDVDSKNIPVPLENDLSEQIHEYLRTINQRIQNDEFD 1440
1441 LDYYIITKKLTKNVHEYQDKNSLGHVLVAERMIKDGYNICVNKEIQYCVCTSEDASRFYK 1500
1501 KTSEKLNNSQCCFSINEIKKYNLKIDKEYYIRNQILSPINRLCQYIEGTSAEKLSSCFNI 1560
1561 YDVKEIKTDKQIEENYLETNVLSLLNESDERFKDIHLKGFLVCSNCMHNVKPNIFIKYFK 1620
1621 CNKCLTYLSIEQIRNYIFSFIHHLCNTFYKQLYICQGCTLKTRRIFLKNDKNCPNINCEY 1680
1681 NKNSLKPLISKKYIYLILEYFLFLLKDNLKKIPSNLVEKNKSEQLNETQDTNNENDITSN 1740
1741 QKEEAKDPNGSISNIHDDINNEHSEKNNHNIYKKNNSNNNNNNNNKDIENEEYCNDFIVC 1800
1801 LCIDEGFKTYIIHDDINKYKNIKVEAYDDICKYRELSVNITKGLKMKYPNISNFLSYLNL 1860
1861 RNNVFFINYNEERDIIRNSIKYIVHNNIYSQIFFDQVFSIFHLPLSTHITEM 1912

Alignement of domain consensus (first line) on the sequence (colored line).

Each position reports the amino acid with highest probability; capital letters mean highly conserved residues (i.e. with probability > 50%).

Occurence 1582...1756 
   1 LesqisDeeRFrdcrLk..ltCPsCgtefieGivssklqCskCnpkipllqltnQLeldI   59
1582 LSLLNESDERFKDIHLKgfLVCSNCMHNVKPNIFIKYFKCNKCLTYLSIEQIRNYIFSFI 1641

  61 RahiskYYeGWlvCdeCgnrTRqlsvygkRlgpAegC..kkGvMryEYsDkqLYnQLlYf  119
1642 HHLCNTFYKQLYICQGCTLKTRRIFLKNDKNCPNINCeyNKNSLKPLISKKYIYLILEYF 1701

 121 rsLF..DvdKakkkntktlksevkalaeqnrelfkklkqvVDkyLsksGdLgslF  175
1702 LFLLkdNLKKIPSNLVEKNKSEQLNETQDTNNENDITSNQKEEAKDPNGSISNIH 1756