Protein PFE1255w (PlasmoDB link) - New domain Rad50_zn_hook (Pfam link)

Sequence and domain localizations (colored) at: 761...806 

   1 MNSTEGIHSISQKNITTNELHENINGSLNNKKRKKEHTAYENGNENGNENGNGNENGNEN   60
  61 ENGNENGNENEYMNDNINDNINQNNVAHMKDLFSQESESLDEEDDSYDSLVDFKKKKKKA  120
 121 IKLLEKEKRDKIINKKGMNNLNGTKDKEKKKKKKKKYIYMDNINEEEENINNVENINILE  180
 181 DSVRNIENVLNNSTKDQLDDDIENDIGGTNLLLDDVDLESFYGSTGKIIKLRIRNFLNHE  240
 241 NLELTFNSYKNIIIGKNGRGKSAIAQAVAVGLGSQGKHAGRDINLANYIKDYDKNKKNLV  300
 301 CSIEIFLSNSGNNAYNRDIYGDVIIIKRMFSSHTSKFYLYGLKKNIYTSGTTTDMLKNVN  360
 361 ENLSLSKCDNDGNNLNNGNNLNNGNNLNNGNNLNNGNNLNNGNNLNNGNILNNGNNLNNG  420
 421 NNLNNGNNLNNGNILNNGNNLNNGNILNNGNNFNKDNIFNNGNNFNKDNILNNGNNFNKD  480
 481 NIFNKDNIFNKDNIFNKDNIYNNKVNDKNKNNKRNPNRYVRKKSYIENYLNFIKVNIKSP  540
 541 CVYLDQEKGKQFFSNITGKTLHKFFMTSVGLNIVEDEIEKESELLKNCLNQIKQKELLLY  600
 601 PFEEELKISRERNKLIEKNFSKLYLYDCNYKKVIFYELLKSCILHFNEYIKYESIKNENI  660
 661 LYSIQYKMNTLINKNEDMKNELKEVLNKDHNIYNDIIKKNIDKICKYNNMIKELNDIKIK  720
 721 HIERKEHILNYLSSFEKAKENKNIVEEYINKYNLQINLLKEKIKKENNKEMELINEINNK  780
 781 ENSIYEMNYLINKYQNNIDDINNKIKYISIQSNKLQKIKNNEIKKKIYIYGYDIYNVRNN  840
 841 IVKFFNTTTITSEKNSYHDNVTNDNINEKDINKNNNILKETKKNYTHNNKNNDNDKNNDN  900
 901 NKNDNNNNHNNHNNHNHPSFYFKHEPIGPVGEYIKLKEPVENTKILSIIEKHLGDIFYSW  960
 961 LVSCYEDKNFLNKMDIENKNKFNIIITNAFVHVNREKLLQNIQFLSSRIKGNTIYSFLDI 1020
1021 DLLPTPLLFYLYDNFKILQTLICKNSKELQELLHSNNKKIIKSIYVIDDFVLVKILSNES 1080
1081 LHYIPSKQEYYKDVLFLKWTKEEHKKNNDMEDEKKKNEINNDNQDNDKDKEKDNDQNDQN 1140
1141 EQKNMKEKKNHVGEHLNLLESEFQTNEEQIKELEKTKIEKEDEISKISKKLLSYKNVVNT 1200
1201 LNESLEKCKYSQDELKYELKNLDELKANHDNIFSEQLDIEIKEKNNDINEIDEYIKDIND 1260
1261 YINILENKKDMALNNNSLYKYFISTHKEYLKTKKEHIQYIIEEYDNLKEILIKLEKDKQK 1320
1321 NDEIALTKKKNFLISINKLHSIYLECIGNNFALDNIFLSNPFLILKDKYESWTVTNVIIK 1380
1381 REKKRVDNLNGVDNPNNINNPNNINNPHDVNNPNDVNNPNNINNPHDVNNPNDVNNPHDV 1440
1441 NNPNDDVIKSSFPFIEPNKEEKKKSNETYLMETIFVIHKNPENISKNDEEHIKVNIPLSC 1500
1501 LNSFNKIFMSSKNTEEDMLESSKDNYNKSVTKIGNNKEREIEILVELEEYVKNIVSNILK 1560
1561 DNDNKKQVDNMDKNNIHPNNISDDNNDEYKHYDENNKTEEKNHSIIPKNIFEYDAVDMLN 1620
1621 EKYEDILWKKRCNKKKEILEILKMHGYIEKENNTDNNLKDYYNNLIEQYINDEKSFNKQL 1680
1681 KQISDLKNNYDMHLSNITLRKSKFVDILEKTKNQITLHFKNMLKRMNNYKGKIEFDDINR 1740
1741 NLKVLISINQDTSNNVFMEINSLSGGERSTIQMALLASFSLTESSSFHIFDELDVYMDEL 1800
1801 TRVKNMRLFCDFVEKNNDKQYFFITPHIEITELFLDDAKQKKAKILNLS 1849

Alignement of domain consensus (first line) on the sequence (colored line).

Each position reports the amino acid with highest probability; capital letters mean highly conserved residues (i.e. with probability > 50%).

Occurence 761...806 
  1 galesekaelkkaieeleeeeseLeekkelikeykseldrlpeelk  46
761 EKIKKENNKEMELINEINNKENSIYEMNYLINKYQNNIDDINNKIK 806