Protein PFF0200c (PlasmoDB link) - New domain HNH (Pfam link)

Sequence and domain localizations (colored) at: 363...426 

   1 MEDNLVKESNEIIGSCTVDGVHSSIMQKNMCSSDIILDDTNSKSLCDSNKLKKDNEKGID   60
  61 ENIKETSTCTYTVDENVMKSNEEKNDEDDDGSNNVDVVGDNIGNLPNENMDNRNNNDNNN  120
 121 INNNIQYDNVNNNNNINNNDSGGYSHSNDILNSNINQIVPFVNNANNEEQNKMREHIGSQ  180
 181 EPVILIDKIERCLVVEWYENNIRREQRISYKKYGNDKAKLRAKELIEKLKSGITFEQLYP  240
 241 DKGPPIVRVFENVGVYNVSLIRDRIEREWRVEWLENGVPMKARWSCKKVGNDEAQKRADT  300
 301 FAQSMIKGIFNPILLHKATGTRFSRSDKSVVKINVYMNKNIKCLTNGIEDDLNTDHHHHH  360
 361 HNNNNNNCVKTFSIKGEVPSSTLNHKVTRSYRRRKKKNDINNTMEIQDGNVRSMTYLVNN  420
 421 NSSYLNHSNNMNPNLCNMNLMDYQMNEMYQGNNMSNMMLLDNNMKNMIHHNNVNNDLLLN  480
 481 SDLYNDKKRTRSSRTTRKRNICKTEKSMITKNGNKYMINNDKNIQMNKNDILVNTYLVKN  540
 541 ELCNNYQNEPNNNNNNNNNNIMMMMNNNKKKVKTQLNNNIKNSYYIPSEQYEMFCSANNI  600
 601 VSGNRNKRANKSAYKITKNNKNNDFVNYNNISNTIPDNVTDEVQNYQYMLNDNMNGEYLN  660
 661 LNEYPMRNTEDGVDNYYQNKNYYYLYNNNNGMLVKTYVVDQEGNHNLVKNNNFVKIENTD  720
 721 YLYGGTSTNKCQPIADKRINNNYDSSSNKYKQNMLEYNNNYNLNVDKKGMNFTGSVSSLD  780
 781 AKKKKRKNSRSSKNRNTLETPYDNYTINYNVTCTKDKRGKNKKDTCENINDNIYENRNND  840
 841 ENLVGAKRRTKRVIATRKKKNARGKYKNNDNEDNNDIDGNEKNIGNEKDKENYEEKIEQG  900
 901 YIKEEYIVHGCEEEVKGLEENKGRKRRRIKSSKFYDNDEYIYSLDKTYNKKKASQYNNNN  960
 961 NDNNNDNNDNNNNNNNDNNNYGNTMVQNEFNRYFMNNNNYMVMNNMHTNNMLNNEGHYLN 1020
1021 NNIYCKNEMQNVSFNNISRENMNMMNIPNMVNMNNLTNINSAYNVKTIENYNNGDKMNNP 1080
1081 SFVNNCIEFVENPRGYRVPYEYQSQRFYEYFEVPLNSRKEFEMQQKYFANLFSLHILAVG 1140
1141 WNVNKGDGMENNNIPQLTDQNMIPNGNNNNNNNTYELVPYNEKENIMNNKELLSSKEQIN 1200
1201 GPYIPYNYKPIYHVEPFSSDVNNNMNSNCNYYIDLENMNSTKIDGKEYTYNEVQTMNNYR 1260
1261 AINKKESLENVANYENMMNYDNISNYNNPDDVINQRSNVANISDHNNNLNNISAVNDVHN 1320
1321 IIDKNNMNHIPYYNDMNNNITNYANMTGIQNLNNMNPIMIDPNNNADSVEEFYDAIDGCN 1380
1381 VVDTNYMVGTNNMIDQIHFNDVTSNVGNMNNNLTNFSNPYNSVKVINDLNNTGEMNNNMI 1440
1441 HLNNKNEMTGLGNMNDNVHINNASVIKENGNSNSSKEMNHMNMEKLYVSQMNYSTNDLIH 1500
1501 MNNNNNKNNNNNKNNNNNNNNNNNSNVNVVGIENSVNSTVYDNMNNYIPMNTINVNYMND 1560
1561 SRSDLMNGKNNINVEYKNVRGYDETLSNRSDMISYNMSGLDHFNDNRYRNDMDPLGKTNI 1620
1621 LNNHNNIGSVNIYNNQTDLINNYFNNNNNNNNNKYANINSSDMYKEQYYNTHMNHLINDN 1680
1681 KEISNNFDDSKKNVKGITNGDNKDLLNVHNNANIKINNTCNINDTSNMLQENNIATNKKD 1740
1741 LQVINKNMVLTYTCNNDDMINSLNGVNDLSNDPNDGSLKENRKNEPSFINTNVNVNVNNT 1800
1801 NKNKVNGDNDIESNTLLGEDNNKINEKTIHSNSIYKNCNGSSDDANVPYENSDHLYFMEK 1860
1861 EKYASDNVVNRNAHNQFKDSYYNLLSNEDVNNNITNENNNNSDDMSCNQYMKKNNNTSNK 1920
1921 IIKEMNNYDFYSNKKMIDKLRSTSNSSTINTEYLPSNLLNSISINNVSQSNQINEHVDK 1979

Alignement of domain consensus (first line) on the sequence (colored line).

Each position reports the amino acid with highest probability; capital letters mean highly conserved residues (i.e. with probability > 50%).

Occurence 363...426 
  1 grcrlcgrafspk....glevdHiieh.ilgnggdndl........eNLrllcpkcHrrk  59
363 NNNNNCVKTFSIKgevpSSTLNHKVTRsYRRRKKKNDInntmeiqdGNVRSMTYLVNNNS 422

 61 hark  64
423 SYLN 426