Protein PFF0320c (PlasmoDB link) - New domain RRM_1 (Pfam link)

Sequence and domain localizations (colored) at: 467...533 

  1 MNKRTLSDDRNTREKNKVGVKRYLMSSDDIYDNPKLYHEKNNGGSKINMSTFLEINEDGM  60
 61 LYDNHNNNIMNGHNNDMCDLSNNNNNNNIFNSLNKIDNNNNIKDNEVNKINNENNNNNIM 120
121 NNINNINNNSNNNNNNNNNNGNNCLSTKYYSNDCKKRKGSRYTSSLPFLKKEKNNGNTVL 180
181 LLKNVPEKVDEEDIISFMRPFLRNKNPEIIFDGQDIIVKLYDDELIESIYTYFNEHPTQI 240
241 KGSFVKVKLSHIIDDNKESMEEQNDILNNYNNNNNNYSSSSSNNNNYSFYHTNHNNHPTD 300
301 VLDKRNSKSNKAECSKVILVSVINLHYPVDIELIYYLFSKCGTVEKIITFSRNPVLYQAL 360
361 VQFDNVETAKEAIKTLHNRNIYDGCNTINIQYSFLKELVIKGNNSSSWDYTISNEKKTKN 420
421 FPVLQNSHGVLPTPSRKSVDSELYQLMEKKFKLVDFEKMNPSKTPVLICYNIPKEYTDVN 480
481 KLFNLFSIYGFVTRIKILREKPDAALIQYSNYIFSSLAQEYLQRARISNQSIEVNFSKIH 540
541 DIRVSQRQQNNESHNTKIFSNYDQRYVLSDQGKYIKAACRPTKCLFISNLNENVNEDCVM 600
601 NLFNKYGNINKLQFLPVKEGKRHLSIIVEMNTEDMATKALMDLHNFYLKDRYIKVSYTKS 660
661 RLM 663

Alignement of domain consensus (first line) on the sequence (colored line).

Each position reports the amino acid with highest probability; capital letters mean highly conserved residues (i.e. with probability > 50%).

Occurence 467...533 
  1 lfVgNLppdtte.edLkdlFskfGpiesikivrDskGfaFVeFedeedAekAldalnGke  59
467 LICYNIPKEYTDvNKLFNLFSIYGFVTRIKILREKPDAALIQYSNYIFSSLAQEYLQRAR 526

 61 lggrelr  67
527 ISNQSIE 533