Protein PFI0355c (PlasmoDB link) - New domain ClpB_D2-small (Pfam link)

Sequence and domain localizations (colored) at: 814...906 

  1 MKNLDANKCIKLINGLKQKKNYPYFSLQCLKNISNEKEKIHDKLLTFIPNNSRKIINSGT  60
 61 KSNYDSRFDKLIQNNKNNKNYNNINYKVIDHNKSNEECNVKNNFSINNKNVHISDINVKQ 120
121 KDKGDDLVIHIKYEPDNNKNGKKNEGQQILYNYDEMNYGNEDKTKLYIMNNYDEVGTKCN 180
181 YKEYVSYNMNPHEYGKREDVNINGNNINNINNINSMNNINNINSINSINNNNINNSYNSY 240
241 NNCKYINNNNNNDYNNFSRHGEKQKKYTMFLKKDDISKNIDQKEHINNLNSINNLDNMNE 300
301 TCDDTTSCTHSKNTRSDKKTDASISGKDDIVRDSYSSDKKKENMENFAKVKITKENIINI 360
361 NEIKEEDVKKVKKVMGHKKETNEYNIKDEKNDNIYDIKVDIKKEEKDNIYDIKVDIKNEE 420
421 LPKSTIASEVPNHNSNVLKNDNIGKKNYFSSGSMKSGNVLKEEIKSDDSKINFQMKNGKS 480
481 SKKCLYPHEIVEYLNKYIIGQSEAKKVVANALRQRWRRIQVSDDMKKDIIPKNILMIGPT 540
541 GVGKTEIARRISMFVDAPFIKVEATKFTEVGFHGKDVDQIIKDLVEIAVKRQKTKFEIEI 600
601 REQAEETVENIILYSLLGNIKEEEKNIWRKYLKDGSLDDKVISIDIPNYINNNIFSNDSV 660
661 ENAVKEALSNHQNIKSVKIIHQNINKQSDKKTMTIREARQKLLQLEIDSSINQDTILKTA 720
721 INSVEEEGIVFIDEIDKICSKSNSSYNGPDASAEGVQRDLLPLIEGCVINTKYGNINTNY 780
781 ILFIASGAFQRVKPNDMLNELQGRLPVHVTLSSLTIKDFIDILTKTHNNLLQQNIALLKT 840
841 EGIDLKFTDDAIETIANAAHDMNFYVENIGVRRLHTIIEKIMEDINYDVYNYVNQSIVID 900
901 KDKVNKSLEGFIKQYDLKKYII 922

Alignement of domain consensus (first line) on the sequence (colored line).

Each position reports the amino acid with highest probability; capital letters mean highly conserved residues (i.e. with probability > 50%).

Occurence 814...906 
  1 LskeelrqIVdiP.NqLkrLqkRLae.rgitLeltdaAkdwLAekG.....YDPvyGARP  59
814 LTIKDFIDILTKThNNLLQQNIALLKtEGIDLKFTDDAIETIANAAhdmnfYVENIGVRR 873

 61 LkRaIQreiedpLAeeiLlkGdtvrvdvdelvf  93
874 LHTIIEKIMEDINYDVYNYVNQSIVIDKDKVNK 906