Protein PFI0860c (PlasmoDB link) - New domain DEAD (Pfam link)

Sequence and domain localizations (colored) at: 170...330 

  1 MSEEEDNQSNNISLERNTVSEECTYSTNERTKKKKLDNIIDEENNKKIKLNNNCYEQDDD  60
 61 EQTLFDNNKINEYNILDNKNVDSNITNNINLNKCNVKVENNILNNITNVQNDILSKENNN 120
121 NNNYNNVQPTTHTSVVTNNEDDSMINKLTNQKYSQRYLQLLEEKKKLPAWSAKKNFLKLL 180
181 KKNNVLIIVGDTGSGKTTQISQFVLESKYTEKKSIAVTQPRRVAAMSVAARVSEELDVEL 240
241 GTYVGYTIRFEDKSSNKTIIKYLTDGMLLRESMSDPLLTKYNTIILDEAHERTLATDILF 300
301 GVIKNIQEKRNDLKLIVMSATLDAEKFQKFFNNSKILNIPGRLFPVEIFYTLQAEKDYVK 360
361 VVIRTVYDIHINEEEGDILVFLTGEEEIEMTKKEIERVVSRNMNAGQLVVLPLYSSLPPA 420
421 QQQKIFEPPPKPRFKGDKNGRKCILATNIAETSITIDGIVYVIDPGFSKQKVYNPRARIE 480
481 SLLIAPISKASAEQRAGRAGRTKPGKCFRLYTEKCFEETLPEQTYPEILRSNLGSVVLNL 540
541 KKLGIDDLVHFDFMDPPAPETLMRALEQLNYLGALDDEGDLTNKGHLMSEFPVDPQLAKV 600
601 LIESPNYSCSSEILTIAAMLSVPNCFLRPKVKVKEADEMKMRFSHLDGDHLTLLNVFHAY 660
661 VKHALVDTNESKKFCFEYFLNHRAMTSAQNVRQQLLRIMERLNLKILSIKPSNPEYYINI 720
721 RKALLSGFYQQVAYKTTKGYYITVKDIQMVTLHPSTVFQMNPEWVVYHELLLTSKNFIRT 780
781 VTKIEGKWLLEIAPNYYNLEDLPNSEAKNDLKMLHKKLNH 820

Alignement of domain consensus (first line) on the sequence (colored line).

Each position reports the amino acid with highest probability; capital letters mean highly conserved residues (i.e. with probability > 50%).

Occurence 170...330 
  1 tpiQaeaipaileGrDvlvqApTGSGKTlAfllPillkkkkdgpqalvlaPTReLaeQiy  59
170 WSAKKNFLKLLKKNNVLIIVGDTGSGKTTQISQFVLESKYTEKKSIAVTQPRRVAAMSVA 229

 61 eelkkllglkvallyGGdsikeqleklrpdIlvgTPgrLld.llkrgalknlkllVlDEA 119
230 ARVSEELDVELGTYVGYTIRFEDKSSNKTIIKYLTDGMLLReSMSDPLLTKYNTIILDEA 289

121 drldmfgddleeilrrlppklpnrqtllfSATlp.rnvedl 161
290 HERTLATDILFGVIKNIQEKRNDLKLIVMSATLDaEKFQKF 330