Protein PFI1080w (PlasmoDB link) - New domain WD40 (Pfam link)

Sequence and domain localizations (colored) at: 507...545 / 557...594 / 613...653 / 701...741 

  1 MKSNLDKKKKKKVQGITGDVKVTSTEDAENDKRKASIKNNKNETFSRFLFPKNPRAFTNL  60
 61 VEYSFSNEQFVTIENIDHTVFHLDIKSCLVRKDSDEGKKQMELIKKKIEKANAFTLLKDN 120
121 DYIYHKPKNCFDYIDRYSQTVPRSFKDECTKTEPQEINEICDTVSQSIIYDAYLHEFQKI 180
181 SNGADGNDKEKYNNDKKDNDDKSKKNNSLSMGLLSDHASSSYSGECSDDDKIGGILFSSE 240
241 SSCSNKTYMFSDNDEFENYKENYEDGSDDYMDYDDNNYEDYDDEDNNDNDDYNDGNIYDN 300
301 DKNVEIHKSSIKNEKDNYDSNMIEEYNKEEEYKDCSYVDEKLKKNKNHLDKLNKNNETRK 360
361 TKQMRKGDKKKRIKKESISGKHELYFINYKDINEQQHKQLNFIYHDNNIKKNDKKILYKK 420
421 NFLKTLKLMDRIYNKNNEEEIYLCYKNKNNKNILTKLWIFSLNIYQLVVTDIKFHPLYED 480
481 LFAISFKNNDFKINMGILCCFTFKNTKNPEHFLKTNFHIHSIEWSTINTSIIIVGLSNGN 540
541 ICIYDLKKNKKESLIFESNFKELYNRDIISQIIFHPQIKIFYSVSYDGYIYQWKYNHKFT 600
601 VGEKLLTLEKDIDDYNNTLNIIHTQSITCIDFNPFKINLFLIGTNKGKIYLYSSTYSDHY 660
661 LNIYNEHTMSINSLSYNKFKRDIFISSSYDWTIRIWTQSRKTSLIIFDIKECVYDVKWSP 720
721 SLSTCFFVISSNGTGKLHIYDLSIDINKEIICEIITKKRKLRKLCVNKFNEVILIGEENG 780
781 YIYSYKISYSFNPCYMDYLKGKRNQYFQIEIMDSFLSKVK 820

Alignement of domain consensus (first line) on the sequence (colored line).

Each position reports the amino acid with highest probability; capital letters mean highly conserved residues (i.e. with probability > 50%).

Occurence 507...545 
  1 geck.vl.gHstVtcvafspdsgpllasgSrDgtikiWd  39
507 KNPEhFLkTNFHIHSIEWSTINTSIIIVGLSNGNICIYD 545
Occurence 557...594 
  1 geck.vl.gHstVtcvafspdgpllasgSrDgtikiWd  38
557 ESNFkELyNRDIISQIIFHPQIKIFYSVSYDGYIYQWK 594
Occurence 613...653 
  1 geck.vl..gHtstVtcvafspdsgpllasgSrDgtikiWd  41
613 DDYNnTLniIHTQSITCIDFNPFKINLFLIGTNKGKIYLYS 653
Occurence 701...741 
  1 geck.vl.gHstVtcvafspd..sgpllasgSrDgtikiWd  41
701 KTSLiIFdIKECVYDVKWSPSlsTCFFVISSNGTGKLHIYD 741