Protein PFL1540c (PlasmoDB link) - New domain tRNA-synt_2d (Pfam link)

Sequence and domain localizations (colored) at: 165...344 

  1 MFFSFFVCFIFVIIEFIESYKKNPQISDIYFRKLNKNYHIKDDIINYNRFKYVYKIKNHP  60
 61 LNEIKEEVLNFLKKKTSFYLVYNKCPLYYKNLCFKEILIRDTNETTSIKNNFYFSHDYLY 120
121 IPQATSLFPYIYDLLKNNNKQNIQKCNDTIYVRNNPYSENTPNNNIDVNNNIEKKQDNYI 180
181 NKEIVENNNVHIINNSNILNKQRDNFCIISNIFRKDNIDKLHFPFFNQMDIYFKITNELV 240
241 HKKKQLVYFLCELLSNIFGPNYKWRIRKDSFDFTTHSLQAEVFHNNKWIEILGSGILKSK 300
301 IIFNKKKKYEINDYLAVGIGLDRIAMIKWDIDRIRDLYLYIYNTEKNIYSVEQHNEKDKC 360
361 SQHISNDIFNKNINEYINHNDSYNHNNVKNYFLKNKKNENQNDKHQDENILLSSPKLEGQ 420
421 KLRHNLLTHIKQKMHIQQKQKIINMPHEEVLYFSNLYNIKDEQRDLSFYSNEQWNNDDFI 480
481 KNIMELKNIKNLHFLKTVYLFDIFLNEQSKKTSYAYKFIYTPTTNIKVH 529

Alignement of domain consensus (first line) on the sequence (colored line).

Each position reports the amino acid with highest probability; capital letters mean highly conserved residues (i.e. with probability > 50%).

Occurence 165...344 
  1 kyDVtlpiepGglHPltreeveGpeVyNlkdaRtLekqkpPikifsrVFRrDsvDATHlp  59
165 NIDVNNNIEKKQDNYINKEIVENNNVHIINNSNILNKQRDNFCIISNIFRKDNIDKLHFP 224

 61 eFHQvElvvDknvsfad....LKGtLeeFlrkfFGeevkvRFRPsYFPFTEPSaEvdvyc 119
225 FFNQMDIYFKITNELVHkkkqLVYFLCELLSNIFGPNYKWRIRKDSFDFTTHSLQAEVFH 284

121 gggWlEigGaGMvhPnVL....eavGieeyfAFGlGvERlAMLkYGidDIRdlyenLrqf 179
285 NNKWIEILGSGILKSKIIfnkkKKYEINDYLAVGIGLDRIAMIKWDIDRIRDLYLYIYNT 344