Protein PVX_000650 (PlasmoDB link) - New domain zf-DNA_Pol (Pfam link)

Sequence and domain localizations (colored) at: 1436...1602 

   1 MSNVFDKLKKQRSKECKATDFYEVKNKNDDIYEVVDEEGYIENKNSLKNFIVGGDKDFDS   60
  61 SDDVIVEDINYGLLRKRTAEKEAKAKRNTPIDDFIREKKIQKIFSTGKLSKEEISKAKDI  120
 121 ERLMDANSSSSGSESDHFNAKRKTRDSYERDRSSREGCHIRQIVRGGRAEGQVKTQVKAE  180
 181 HEENVDATAADVDEGDLDGEDHLDGEGTPERSKKRRVLTGGATPEGVKYTPGDFSTEICK  240
 241 GEEEDVKKRNERGTPLCGIKQESTPEGQSSDQRSIVARLEENHPVETFLQMGDPPPATIK  300
 301 MKNEVRGSPCDGEDDQEKSRLITTIGMKNKPDELVTNEETGFVNVYIFDICKHRNSIIMF  360
 361 GRTLTKFKIYRSVSIYIEDMYRCYYFLLSKTMVYKKDGVEIKYGHKNYNTCIMSDFLEEF  420
 421 RAVRKYHNIESIKCKIVKRRNLNLSSSDEDVYAKIFYTYNCDPISERYLSGRTYSAFYCC  480
 481 NEDVIENFVIKKNLKLPCWVKVRGLKLNLTNNLTYCYFDCTTANWKNVYPVEKRLGGKAA  540
 541 IGGVSAVSGGSSGGSAANGGSAANGGSTPNGVAAEEGHRKGDPSAGGSGHLADLDLNKVV  600
 601 IKVVSLLNEENHHEVFSICSMVDAEGMKYINFCGISTKAAKKKNLTYNKSNAKLFDSEKN  660
 661 LLDAFLQKLKTLDTDIYIGYNILNFDLEFVIHRCNVHNLNADFLSRKKKLKKNDKMKVNK  720
 721 FNGTSSTGSMYNIIQNIKGRLIVDIYMLCKDLIKLTSYGMDEIVDSVRGRFQEGASAAKA  780
 781 ANAANAASAARSSNKASKANAASGTASTSSTASASSPPNVFKDFSVNNINLLNCSNIHLY  840
 841 DAQQLLENHLNMYIHSQLFCVQEIANVCKVLQIIEKTRDLTKLSGYLWARSLLCYTSERI  900
 901 EYFLLHEYNRKKFITPVVKKRVKKIDSEQVKNKAAAKYSGGLVLEPLCGYYDTFVLYLDF  960
 961 NSLYPSIIIEYNVCFSTLKGRGEAANLGEAANLGEAANRGEAANLGEAANLGEAANLGAI 1020
1021 STELGDAEADAAVALSEAVEVDDFDRTKPGILPSILKNLVEKRAFIKKLIANEKNKEKKE 1080
1081 LLLIQSLSIKLISNSIYGCLGNSNNRFYAKHMAAFITLKGRNLLQHTKSRVEREFNLKVI 1140
1141 YGDTDSIMIDTGIKAQGGSNYKEAFRLAHVIKNTINKSYKRLELDLECIFSKLLLLKKKK 1200
1201 YACAKVVDANMERCEYEMKGINFIKRDFSRISKLIGNEVLKIIFSSKDGQAVGGGGGAGS 1260
1261 AGSADPPVENDLSEQIHEYLRGVHQRILADEFDLDFFTITKKLTKNVSEYQEKNSLGHVL 1320
1321 VAERMMKDGYNISVNKEIQYCVCTSEDACRFFNKPGHEKLSNSLCCFSLSEIHKHNLRVD 1380
1381 KDYYIRNQILSPINRLCQYIEGTSAEKLASCFNIYDVREIKTDLQIEENYQEANVLSLLN 1440
1441 ESEERFKDIHLKGYLTCSYCSHNVKPAIFIKYFRCNNCLRYLSIEQIRNYIFSFLHHLFA 1500
1501 TFYKQLYVCSSCMVKTRRVLLNGAKDCPSPNCESPKGSLKPLVSKKYIYLMLEYFLFLLK 1560
1561 DNLREVPPGQHAANTATAPTTAEGAAPYASDVLVYVCVDEKFKTHISSDQKPGKKNLRVE 1620
1621 AYDDICNKKELGVTITKGLQMKYPNISNFITYLNLKSSQFCINYNEERTTIRHSLQTLVR 1680
1681 NNVYAQIYFDRVFSVFQQPLAGKIAQL 1707

Alignement of domain consensus (first line) on the sequence (colored line).

Each position reports the amino acid with highest probability; capital letters mean highly conserved residues (i.e. with probability > 50%).

Occurence 1436...1602 
   1 LesqisDeeRFrdcrLk..ltCPsCgtefieGivssklqCskCnpkipllqltnQLeldI   59
1436 LSLLNESEERFKDIHLKgyLTCSYCSHNVKPAIFIKYFRCNNCLRYLSIEQIRNYIFSFL 1495

  61 RahiskYYeGWlvCdeCgnrTRqlsvygkRigqAegCk..kGvMryEYsDkqLYnQLlYf  119
1496 HHLFATFYKQLYVCSSCMVKTRRVLLNGAKDCPSPNCEspKGSLKPLVSKKYIYLMLEYF 1555

 121 rsLkkkntktllegd.dap.ekesksevkalaeqnrelfkklkgslF  167
1556 LFLLKDNLREVPPGQhAANtATAPTTAEGAAPYASDVLVYVCVDEKF 1602