Protein PVX_080560 (PlasmoDB link) - New domain DNA_photolyase (Pfam link)

Sequence and domain localizations (colored) at: 491...662 

  1 MKEQAGITSEPGEVPNERGRNTLLVSERGKEPNAHSEGPPTDPRGETHEEKQPLRQEVPT  60
 61 RSITTGEEEEKNKNKKKKKKTEHVIKENTKSDIKGEKTNKESPKMNRPEDQNGKGANLDE 120
121 ETFVKKAPSDDPLLIPGEGRASKMGTNKAQTSKGEEKSKLAKLTKLMQGRGSKQDEVGRM 180
181 GNPVRGKNGSLGRGGGQVSGKDGSLESKNRLVERRNGSARTPKGSLGSSGGLKNSPAGCS 240
241 GGPKNSPAGFSPNSAPRSTSKFVSKSAPKLASKLAPKLVSKVAPKLAPKLAPKSTLNSAP 300
301 SAKPHTPRSGPASAPTLNRFKCASLKKVPPSTPQKPKGKTNFPSVHPPLRKESSTPRGSE 360
361 DQRKRNPYETSREKKLTILAKRVRCLTSFESGAESGGGGDAAKLRCSTEGSGGGDAAKMR 420
421 CSAESSGGGDAAKMRCSTEGSGGGGDASNPPSIPPGEEPNHASPTSIPHGEEPNHASPTS 480
481 NPSSAANEQRDALLLLLTRDFRANDNWALTYAYELAKKKGLNLIACTYLNRKEKLTSRFI 540
541 NAKLKVLKNLEQALKQMNIPFYILPLFMIDEFKEFIKTHHIKVIACDLHVLNDERAFIKS 600
601 LCHICNKRKVKVFQVDSHNVIPIWVTSKGEECSVRTIKPKIQALLPTFLTEYVLLSPFEQ 660
661 KIKFPEPFDMEEVASKLTVTNTCAVVSGAVFTEKKAQELLSHFCRQVLDKYNVKRNDPNS 720
721 DAATVLLPYVNMGVISAQRCILEVHKHAYSNPSINAVSGKESFTDDFIMRKELADNYCYY 780
781 NRNYCTFEGGRDWAKESLKKHDADKREYLYDYEDFRTAKTHSDLWNCCQLQLIDEGVMHE 840
841 FLKVYWAKKILNWSANSQVALKYAMQLNEEFSIDGKTPSGYVSIMWSIMGVHDQGWNERN 900
901 IFGKVRFINSNGCKRNFDMNMFMSKYPKGKENASIVKKIPTITFASYLKKRKHGPAAPLQ 960
961 ESTREKRGRGPAR 973

Alignement of domain consensus (first line) on the sequence (colored line).

Each position reports the amino acid with highest probability; capital letters mean highly conserved residues (i.e. with probability > 50%).

Occurence 491...662 
  1 savVvWFRrDLRLhDNpALeyAaaaAaaaaap.vipVFillgaanpgrFLlqsLedLd..  59
491 DALLLLLTRDFRANDNWALTYAYELAKKKGLNlIACTYLNRKEKLTSRFINAKLKVLKnl 550

 61 .qsLraLGsrLlvrrgdpaevllrlakewgAshlffnhdyepyslrRvkkaLaeaGr..v 119
551 eQALKQMNIPFYILPLFMIDEFKEFIKTHHIKVIACDLHVLNDERAFIKSLCHICNKrkV 610

121 avetfnshtlyePgvldknGgplvytpFlkiwsklpepvpplepvpppkklp 172
611 KVFQVDSHNVIPIWVTSKGEECSVRTIKPKIQALLPTFLTEYVLLSPFEQKI 662