Protein PVX_085160 (PlasmoDB link) - New domain MutS_II (Pfam link)

Sequence and domain localizations (colored) at: 12...112 

  1 MENGEGVELNEEQILCLYIDTKKYQKTLGVCFYNYLKYEFLMTEFIDNGYFTALESLFIQ  60
 61 KRPYKCFFNSMNDLVDDERLLNLFKMCNIEAVALERKKYDVSNLKEELKLIIPQNDDVRN 120
121 YDKHLELENACKCLMVLINHLKVKENKDIHYQCSINIHNMDLYMRLDKAAISALNILPNK 180
181 KNTNSYSNNTSLLKFLNKCNTTIGCKKLMSWLTQPLTSVSEINKRLNIVETFIEEDDLRN 240
241 SVYCNYLKRIPELDKLNHYLKEINQNNEIKGNSKYNEEMILKDIVKLYYAILDFKQIYFS 300
301 LVSIEGKHKQTVIEMVVNPLHEILNNFSKLLDMIEMTIDLKEIEENKVYLISKNFDEELE 360
361 EISNEKNALMKKIKRHKEDVERDLFSDKCDRRYKRTNREDIRLVDCNTNVFLFRVSKKDS 420
421 TLIQHQKKCISVRMNKNEFLFTTSTLKGLCKQYEHCLNIYNTLQLEIVKKTICAVSTYTP 480
481 VIEKFIDVVSTLDVLVSFAVVCYNSPFPYVRPTVVEDGENVIMKKSRHPLLELQHNLSNF 540
541 IPNDIHMNKKESRLIIVTGPNMGGKSTYIRQTAIICILAQIGMFVPCDFCEIPVFSQVMC 600
601 RVGASDFQLKGISTFLSEMIEASAIVKNADKNSFIIVDELGRGTSTYEGLGISWSIGKYI 660
661 LDHIKCFCLFATHFHEISNIAYQCEGVINRHVETTIDQKQKKICFLYEIKDGASNKSYGV 720
721 NVAEIAKLPKDVIQRAYEKVEELESAENKYYLKEKLNIDTSSSTNENYKNKISNYMKIKD 780
781 EINYLFSSSSESEFMDRFMSKKSYLKEFAI 810

Alignement of domain consensus (first line) on the sequence (colored line).

Each position reports the amino acid with highest probability; capital letters mean highly conserved residues (i.e. with probability > 50%).

Occurence 12...112 
  1 NylaAlkiskkgdgnryGlaflDlstGefgvsefeDddafeeLlaeLsrlsPkElLlpes  59
 12 EQILCLYIDTKKYQKTLGVCFYNYLKYEFLMTEFIDNGYFTALESLFIQKRPYKCFFNSM  71

 61 felesaeedllefgvedldgfGleelplalctqkrnlphlq 101
 72 NDLVDDERLLNLFKMCNIEAVALERKKYDVSNLKEELKLII 112