Protein PVX_086105 (PlasmoDB link) - New domain WD40 (Pfam link)

Sequence and domain localizations (colored) at: 599...717 

   1 MYAFEKKEETYFTKAIYAYGINRNVKNPFYLLEENCLFYCIGTNGVIHSVSERKQKFLLS   60
  61 DESSYGIVCLGVSNDRKLLVLGERSVRKPFLSIYTNSSKLVKRITLEIADNECTIMSISF  120
 121 SSKNKYLYCLTNGSTKSLFFCYDWLQGKLMYCKIFPPSLFCDYCDICLNPQNSSYVALLS  180
 181 VCGVSGEAIGQATAHVLADAAADAAANGAANVTIGATSSGSASGNANLTADYDAPGQSNR  240
 241 NVTQQVNPVGPPTKRHVFLYHNVDRNLVEIKIKNKKLDKIDRNFTNCCWLSDGVLLLTNR  300
 301 SNHLIFYDAKKEKVKICNKHLSSLEVVKVACLSRGFLLFDYEGVHVYERSPDLSTNLSYA  360
 361 AKYCARFNFSALMSGYCLVSPCEKFLYFLAQDGHLKRFDMWRGRCSGGSGGGGDGGDGEE  420
 421 QVALEGSKGDSGLGGDNPPGGSAVQSTTDADRLPLSDDRLTIDADRSPPFKHYEKHVETV  480
 481 LADVSPAKINDFDVCMKHPLIILCYDDNVIKIINYRKKEVVMSNSFNNEPLHLSIHCSGH  540
 541 LLLVAFTDKLRLFHILYNKLKIKKEFFLKNCSCCKFSNGGSFMAVSKISTIYIYKTYTYE  600
 601 LLYVLKSHVNYITDLVWSCNDFSVFSIGKDGYLFEYSLHNNGNKNMEVMQKEKKFLSIDL  660
 661 EILNEKNKKKEDDKQNRDNSPNQGKYGNEYKSFNNLRTNEMKNVFVSCDDKTIKQFCNSK  720
 721 VECVLESEYVVEKILLYKNKFLIASFYNGFYCRIRFYVLPLCGLYLEIPCHILNCVNLKL  780
 781 DANRELLFSCSRDGSIYIFSIEKMDSSFLFQNGSSPLGQVKKGVQVGNVPTGGKEDDQVG  840
 841 SVNPQRGQLLSSANDTTGVYSEELLSKGELPSGTASTNGREASPSGGVLPTGGTANEKKL  900
 901 SLSDLSAERGDNPIGDGAHDPKEENKMKSNFLVYDLENKTNYALNEEEKESDDILIDFHY  960
 961 VQKKNKEFLELQKKITNLKNQMELEMKNRESIHKSEMSKLDKQKNVEIKNLLRINKNIIK 1020
1021 EKDKVEETCKKTLYELEEKHTCFVNQLNAQFYLTNKICEEKFLKIQEEFNLYKKKSTEEN 1080
1081 LDLKKEHQMKVTQLTAQRDEEVKKKNEFIENLKEKYENLQREKEEYIKQIEEDVDEEILL 1140
1141 ISQKYEQQIGELKQDKYDLLGKFKLYEHIEGELKESIQLEKEKFVKNNITAKRLQESIDH 1200
1201 LKGEVATLKESLAEKDDEIESKNKDISNLNKKTEELEKLKIVLSQKIKDLESNLSPKNSE 1260
1261 IKIMREKIEEMSKCFENNHKKTVNLQIEINEYKMKIKSLHDDLLCNNKTIGNYEKILKNL 1320
1321 QEHIKECYLHLHDKKIFNASFLNLYNKFHKVNDVKNYDAKNVFSEYLRQKEHLENMIEVL 1380
1381 KDKLQKESEAFRAEKIKMMNENSLLLKEINDLKVDLNFLKAECHDAQLMNRKIQFLRKYN 1440
1441 KKGAVGSPSKQVPPEG 1456

Alignement of domain consensus (first line) on the sequence (colored line).

Each position reports the amino acid with highest probability; capital letters mean highly conserved residues (i.e. with probability > 50%).

Occurence 599...717 
  1 geck.vl.gHtstVtcvafspd......................................  59
599 YELLyVLkSHVNYITDLVWSCNdfsvfsigkdgylfeyslhnngnknmevmqkekkflsi 658

 61 .........................................sgpllasgSrDgtikiWd 119
659 dleilneknkkkeddkqnrdnspnqgkygneyksfnnlrtnEMKNVFVSCDDKTIKQFC 717