Protein PVX_087820 (PlasmoDB link) - New domain DEAD (Pfam link)

Sequence and domain localizations (colored) at: 98...626 

   1 MFKGMLIGRNRNSTASAGGELLKEGQSREGTDRRDDHIEDRRDDPRGKGPKASRAHISRT   60
  61 NSKGVNFKEGLQKASFLEFNFKTDVYLKLNEMKIFTPTQIQRNVIPLLLQGRGDSTGGSG  120
 121 EVATYEGNADVYREIVRRRSCINGYLRESFNVRGDFYDVGKYQSGGGENPLGEYPLGRHA  180
 181 NRSSAPPPGEEANRGGEKTKCFNDVYVIVSPDNTGKTLSYFLPILNNFYLNNEKIMKSLS  240
 241 KFYHFLNKYNYKKFRNKLFRKKEKLRCANRRMDNLFFHIAYEKRRIRNRYIYMRRYKNYN  300
 301 VSRSYVKNKKNNALNCLRHKKNVFFPYAVILTNTREAAFELFSFLKSFDVNIELLAGGYM  360
 361 YKRKSVKKFHVEMLPPLGDGGGQDMEYADNLYHSHGEDPLGGYPNVRSEFIKTNDFLKKI  420
 421 SKNVKRRAKAINYNVDILVGTPDKIFEKIDNCKNKHLYNFKFLKYIVVEQAETLCNAFNE  480
 481 GKLQLVLNHIGNYTNMYYFRGGISADDQHTGGIPRDVLKDDRLGDPHDDAREGQKKGFDL  540
 541 ENEEAPRSTRRGRRRNSPNQHKRTDMALGGGNNEESPDGCEEGEVGQATDAGSDVRSASK  600
 601 WCDGEGKTGEVFMGSSTNGESPPEEATPRSSERKPAQQEEHADRGEIIRLVNRGGAENEK  660
 661 NTLGSNIPIAIFVSATKTFCISEFLANNVRSKHIQEVIHLKSHDISSEMKHIFINSKNKE  720
 721 KTALLLELLNSKDARSSARMKGEARSGHFPSGPILSRHFLSKHVIFCNTRKSVQNVADLL  780
 781 TELKYKVSCIHNEMSYKERSQNYRRFKKNKTNILVCTNILSRGVQFENCHIINYDISNNI  840
 841 NDYIYKSSKVAHTNGSTACSGRGNSLTSFFGKKNTSLVNEIIEKTADKKQIIFQNLNKKV  900
 901 SKMLKLQNMYYDIVKKKKRYQKKGGRKALHISPRRNCLSKKNKILSKKLYFYNKMNVERK  960
 961 RLIKKGILKGHEKIPRFPNRKAEVYDSNEYNSMHRLDDGALQILAKKRKTKRNKKEEGAH 1020
1021 YEQDTIVLDTMPTYEEEAKAKEKRHQKKTYF 1051

Alignement of domain consensus (first line) on the sequence (colored line).

Each position reports the amino acid with highest probability; capital letters mean highly conserved residues (i.e. with probability > 50%).

Occurence 98...626 
  1 tpiQaeaipaile...........................GrDvl...............  59
 98 TQIQRNVIPLLLQgrgdstggsgevatyegnadvyreivrRRSCIngylresfnvrgdfy 157

 61 ..................................................vqApTGSGKT 119
158 dvgkyqsgggenplgeyplgrhanrssapppgeeanrggektkcfndvyvIVSPDNTGKT 217

121 lAfllPileallk.p............................................. 179
218 LSYFLPILNNFYLnNekimkslskfyhflnkynykkfrnklfrkkeklrcanrrmdnlff 277

181 ................................en.nqeskplkkkkdgpqalvlaPTReL 239
278 hiayekrrirnryiymrryknynvsrsyvknkKNnALNCLRHKKNVFFPYAVILTNTREA 337

241 aeQiyeelkklllgl............................................. 299
338 AFELFSFLKSFDVNIellaggymykrksvkkfhvemlpplgdgggqdmeyadnlyhshge 397

301 .................kvallyGdsikeqleklkkgpdIlvgTPgrLldllrkrga.sl 359
398 dplggypnvrsefiktnDFLKKISKNVKRRAKAINYNVDILVGTPDKIFEKIDNCKNkHL 457

361 d.lknlkllVlDEAdrll.dmfgddleeilrrlpr.pk...................... 419
458 YnFKFLKYIVVEQAETLCnAFNEGKLQLVLNHIGNyTNmyyfrggisaddqhtggiprdv 517

421 ............................................................ 479
518 lkddrlgdphddaregqkkgfdleneeaprstrrgrrrnspnqhkrtdmalgggnneesp 577

481 ................................ktllfSATlp.rnvedl 529
578 dgceegevgqatdagsdvrsaskwcdgegktgEVFMGSSTNGeSPPEEA 626