Protein PVX_087875 (PlasmoDB link) - New domain MutS_II (Pfam link)

Sequence and domain localizations (colored) at: 37...185 

  1 MSEDIFPILGEPQSGSPAVGTAGADSPAMDADSVVSPTVMSFNMETKNNIKYSGICIYNM  60
 61 NTNEFSLCEYIENEHFTILESLLIQCRPTCFLYLSSNDKLDDKRVKLILSLCEIKHRELG 120
121 KSDFYNSCSMENDLNKLLKPTEDVKNCISFFKMQLACRSFTSIVKHLNLLNDYSATNKCL 180
181 LTNYNINRYLKLDMAATIALNVHAEHMLVEKKASGSRGGNLTLFTFLNKCKTKIGERKLL 240
241 QWVMHPIRDEAKINERLDMVSILKEDGVMRSMIQSDYLRKVSDLDVIIKKLKIVNSAMGE 300
301 LEGEGAARRMEGGKMEGGKMEGGKMEGGKMEGGKMEGGKMEGGKIEGGKTGAKKAGGGKN 360
361 TCSIEDLVKMYDTVVVSKRIYYCLNDYEGKHRNTLERNFLTPLKEVLICLDSFVKLIELT 420
421 VDFDELCNNNFLISRKFDEQLEKLASEKDETLGMIKEHRQEVEDDINHLKGVSKKNNAKE 480
481 DIKLVDCNVNTFLFRAVKKDMSSIQQRKKTYFQVRMNKSEILFTTNKLKELCKRYEYILQ 540
541 DYNLSQEQLANKAIQVASSYWEPTTKLAKLIAQIDVLCAFAFVSASSLSVYVRPIVETNG 600
601 QVLHLIESRHPLVESNFLLMNNFIPNDVHMNKTDKRLNIITGPNMGGKSTYIRQIALICL 660
661 MAQIGCFVPCTYAKMPIFSQIMCRVGSSDIQLKGISTFFSEMIEISAIIKNADDNTLVII 720
721 DELGRGTSTYEGFGISWAVAQYILNKIKCFCLFATHFHEMSNLEDEYQGATNNHVGAKID 780
781 PEKKKISFLYEIKKGYADKSYGVHVAQIAKLPQKVIDKAFEKSKELESVENRHYFRTKLA 840
841 GGKLHGEELPGATLPGTNPDDVHKTDVQSKTHDLLRGIFSATDEESFISHVGQNTEALRE 900
901 ALREM 905

Alignement of domain consensus (first line) on the sequence (colored line).

Each position reports the amino acid with highest probability; capital letters mean highly conserved residues (i.e. with probability > 50%).

Occurence 37...185 
  1 NylaAiskkdkgdgnryGlaflDlstGefgvsefeDddafeeLlaeLsrlsPkElLl...  59
 37 PTVMSFNMETKNNIKYSGICIYNMNTNEFSLCEYIENEHFTILESLLIQCRPTCFLYlss  96

 61 peslsesevlelrdrvgrrptwefelesa.....eedlledf.....gvedldgfelpla 119
 97 NDKLDDKRVKLILSLCEIKHRELGKSDFYnscsmENDLNKLLkptedVKNCISFFKMQLA 156

121 lcAagaLlsYlketqkr...Dsrnlphlq 149
157 CRSFTSIVKHLNLLNDYsatNKCLLTNYN 185