Protein PVX_088085 (TriTrypDB link) - New domain Vps4_C (Pfam link)

Sequence and domain localizations (colored) at: 1032...1084 

   1 MKGEKMQPPYPPRKARVPCFLVVALVLPLIVQLSHQIGLKKDVRFTLGSGSHQSRFPFAK   60
  61 RKNLGNSLFLPLGRKRNTLTSIGTDLFKERDSPGGVKDEWKSRVVNEEASKNGGHHPAVG  120
 121 IPIDGKSDRKEKHLGGDARLGGNVPTGETNLGITPSEEQTHIVQNNLVSGLISRFWPFGE  180
 181 KKERGSGREETPKGSANGGGGGDPPEPEKHPWWGNTPKESASVDTPPGEASSEAPPEGGP  240
 241 PRERRRPSRGSDQDKETNFLLKALETGKFPSYCLVENVDEQIDNCEIYLSKAKMEELNLS  300
 301 EGFTVLLKGKKKKEMLAIAKLDRRLQKHFVVISFAMKKNLRLMHNDIIKIFPLMKVHPLR  360
 361 TVVLSPFSDTVGGLSKAELEQEVLRPYLKGTFKPLCEGTNVYIPHKGRKVEFRVVKLVKE  420
 421 GEEAARKEEQPLRESRADVPTSQHYGYVGDNAIITLDEEYLNREDYEEHTDDITYEDLGG  480
 481 MKKQLNKIRELIELPLKYPEIFISIGISAPKGVLMHGIPGTGKTSIAKAIANESNAYCYI  540
 541 INGPEIMSKHIGESEQKLRKIFKKASEKTPCIIFIDEIDSIANKRSKSTNELEKRVVSQL  600
 601 LTLMDGLKKNNNVLVLAATNRPNSIDPALRRFGRFDREIEIPVPDEQGRYEILLTKTKKM  660
 661 KLDADVNLRKIAKECHGYVGADLAQLCFEAAIQCIKEHVHFLDLDEEDFIAFMELSVEGE  720
 721 RLSGDEGRRSGTRPLLSDTRPPVTASSPPPRGAKKIPPYILNKLTIKAKHFQHALNICNP  780
 781 SSLRERQVQIPTVTWEDIGGMQDVKEQLKETILYPLEYKHLYAKFNSNYNKGILLYGPPG  840
 841 CGKTLLAKAIANECNANFISVKGPELLTMWFGESEANVRDLFDKARAASPCIIFFDEIDS  900
 901 LAKERNSNNNNDASDRVINQILTEIDGINEKKTIFIIAATNRPDILDKALTRPGRLDKLI  960
 961 YISLPDYKSRCSIFKAILKNTPLSADVNLHEMAKRTEGFSGADITNLCQSAVNEAIKETI 1020
1021 RLVSQRKGGPEKRSGAKANGGADDHYDPVPTLAKKHFDLAFKNARISIRPEDVLKYERFK 1080
1081 EKLSLQSFD 1089

Alignement of domain consensus (first line) on the sequence (colored line).

Each position reports the amino acid with highest probability; capital letters mean highly conserved residues (i.e. with probability > 50%).

Occurence 1032...1084 
   1 GDpgAiakglsdkLlePlp.ltmkDFikAlrttrPTVnkdDLekheeFTndFG   53
1032 KRSGAKANGGADDHYDPVPtLAKKHFDLAFKNARISIRPEDVLKYERFKEKLS 1084